DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52c and Ir68b

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster


Alignment Length:674 Identity:127/674 - (18%)
Similarity:239/674 - (35%) Gaps:191/674 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YRLFGLLQRLQVEKSYDTLLVYGEDCAIPSLFERLQVPAVLVSSGSTNFDWNFSSLTL------- 88
            |.|..:..|:.||::.....:|  .||        ..||        :||.::|:|.|       
  Fly    17 YALAEIACRIAVEQNVQVTYLY--RCA--------SCPA--------SFDADYSALELDLYRCVG 63

  Fly    89 ----ILSCNFQDEREENYRTLMKLQTSRRLILLKGHIKPESVCDFYS----KKEQHNVAMVKENF 145
                :::.|.:....|.:|....|...:.....||......:.|..:    :|..|....|..|.
  Fly    64 SRLPVITRNMEAHELEPFRRTDSLSIFQIPAAEKGDSLVRRILDMLNPHQRRKHMHKYLFVWPNA 128

  Fly   146 YQLEVVYSCRLFQDQNYEKL---------------------------NLFDGKSIYKDQFRNMHG 183
            .:.:::   |||:....:||                           ...||:..|..:.:::.|
  Fly   129 GRHQLL---RLFRGSWAKKLLYGLAITGRENGTFDFDPFAWGGLQVIQRLDGEVPYARKVKDLRG 190

  Fly   184 APIRTLSDKEPPRTIPYIDSKT-GEEKFKGYVGMLISQFVKKVNATMQIREDLIKDDEE------ 241
            .|:|.....:|...:|....:| |.:...|....::.:.   :||::..   :..:|.|      
  Fly   191 YPLRFSMFTDPLMAMPRSPVETAGYQAVDGVAARVVGEM---LNASVTY---VFPEDNESYGRCL 249

  Fly   242 --------VSFVDI----TNFTSND--ILDIGICEARTLEMSNYDAISYPYLMSSYCFMAPL--- 289
                    ||  ||    |:|..|.  :||   |....:|      :.|||...:...:.|.   
  Fly   250 PNGNYTGVVS--DIVGGHTHFAPNSRFVLD---CIWPAVE------VLYPYTRRNLHLVVPASAI 303

  Fly   290 -PDSLPFSDVYMAIVAPSILIMFLIIFCICSVLIIYIQERSYRSLTIRSVL--------MNDICL 345
             |:.|.|..|:...|...:|:..|::     ||:.::.:|..|.:..|.|:        :.::..
  Fly   304 QPEYLIFVRVFRRTVWYLLLVTLLVV-----VLVFWVMQRLQRRIPRRGVIQFQATWYEILEMFG 363

  Fly   346 RGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYT 410
            :..:.:|......::.....:...:.||.::| |:|.|.|::....|..|.::...||:    ..
  Fly   364 KTHVGEPAGRLSSFSSMRTFLMGWILFSYVLS-TIYFAKLESGFVRPSYEEQVDRVDDL----VH 423

  Fly   411 MAINIYE-REFLEALNVSLEDVEIYDYG----KFSKLRSTFNTNYLFPVTALQWFTINEEQKLFK 470
            :.::||. ....:|:..:|.:   :.||    :..:|.....|:|..||...:     :.:..|.
  Fly   424 LDVHIYAVTTMYDAVRSALTE---HQYGLLENRSRQLPLGIATSYYQPVVRRR-----DRRAAFI 480

  Fly   471 YKIFYYCDAFCLNQFD------------------ILSIPLRRHLPYRDIFEEHMLLQKEFGLTKY 517
            .:.|:..| |....:|                  |.:..|.|..|:.     |.|.....|..::
  Fly   481 MRDFHARD-FLAITYDSQAERPAYHIAREYLRSMICTYILPRGSPFL-----HRLESLYSGFLEH 539

  Fly   518 WIDQSYRDMIRANLTTFKDFSPLLENDYIE----------------VHN---------LYWVFTM 557
            ...:.:|.|   :|.|....||..| :::|                :.|         |...|.:
  Fly   540 GFFEHWRQM---DLITRVGASPDAE-EFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQGAFYL 600

  Fly   558 YFVGMGMGLCFFILEILRPLRYWR 581
            :.||:|:....|.:|  ....:||
  Fly   601 WSVGIGISCLGFAVE--HAHWFWR 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52cNP_725470.1 None
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 52/296 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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