DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52c and Ir67b

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_648393.1 Gene:Ir67b / 39194 FlyBaseID:FBgn0036083 Length:574 Species:Drosophila melanogaster


Alignment Length:626 Identity:120/626 - (19%)
Similarity:238/626 - (38%) Gaps:145/626 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RLFGLLQRLQ--VEKSYDTLLVYGEDCAIPSLFERLQVPAVLVSSGSTN--FDWNFSSLTLILSC 92
            ||...:|.|.  .:...:..|.:|....|....:...||.:.:.:....  ...||:|.||.: .
  Fly    19 RLVQTVQELNNIYQTELNVFLEFGNGADILESAQGTFVPTLWIKNPQNQKVMKGNFTSCTLTI-L 82

  Fly    93 NFQDEREE-------NYRTLMKLQTSRRLILLKGHIKPESVCDFYSKKEQHNVAMVKENFYQLEV 150
            ..:||..:       |:  |.:......||...|        ..|.|..|.......|.|..:.|
  Fly    83 YLEDEHLDRGLYYLANW--LWEYHHLEVLIFFNG--------GSYDKLIQIFSRCFNEGFVNVLV 137

  Fly   151 VY--SCRLFQDQNYEKLNLFDGKSIYKDQF------RNMHGAPIRT-LSDKEPPRTIPYIDSKTG 206
            :.  |..|:....|:.|.:.:.||| |:.:      .:::|..|.: |.....||...:.| :..
  Fly   138 MLPGSDELYTFMPYQDLKILNLKSI-KEFYSLSRKKMDLNGYNITSGLVIAGAPRWFSFRD-RQN 200

  Fly   207 EEKFKGYVGMLISQFVKKVNATMQIREDLIKDD-------EEVSFV-----DITNFTSNDILDIG 259
            .....||:..:|..|....|.::::...|..:|       ..:.|.     .:.:|:.::||.:.
  Fly   201 RLILTGYMLRMIVDFTNHFNGSVRLMNVLTVNDGLELLANRTIDFFPFLIRPLKSFSMSNILYLE 265

  Fly   260 IC-----EARTLEMSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCICS 319
            .|     .:|.|.       ::.||:..|.|           |.::|       .:.::|:|..:
  Fly   266 NCGLIVPTSRPLP-------NWVYLLRPYAF-----------DTWIA-------WLIMLIYCSLA 305

  Fly   320 VLIIYIQERSYRSLTIRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMYTAY 384
            :.|:     |...::|.:..:..:.|..:|:.......:...:...:|:::..|..|.|.:|.|.
  Fly   306 LRIL-----SKGQISISAAFLKVLRLVMYLSGSRDMGTRPTTRRLFLFVILTTSGFILTNLYVAQ 365

  Fly   385 LQAFLWGPPIEPRLTSFDDVKKSR----------YTMAINIYER-EFLEALNVSLE-DVEIYDYG 437
            |.:.......|.::.:::|:.||.          .||...|.:| :.|:.:..:|| ||:.|   
  Fly   366 LSSNSAAGLYEKQINTWEDLDKSDSIWPLIDVDIKTMEKLIPDRTKLLKKIVPTLEADVDTY--- 427

  Fly   438 KFSKLRSTFNTNYLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDILSIPLRRHLPYRDIF 502
                 |...||:.:                   :..|:....|.|.|...|..|:.|..|:. ::
  Fly   428 -----RRNLNTSCI-------------------HSGFFDRIDFALYQQKFLRFPIFRKFPHL-LY 467

  Fly   503 EEHMLLQKEFG-----LTKYWI-------------DQSYRDMIRANL--TTFKDFSPLLENDYIE 547
            ::.:.:...||     |..:::             |.:||..|::.|  ..|:|....::::.:|
  Fly   468 QQPLQISAAFGRPYLQLFNWFVRKIFESGIYLKMKDDAYRHGIQSGLLNLAFRDRHLEVKSNDVE 532

  Fly   548 VHNLYWVFTMYFVGMGMGLCFFILEIL---RPLRYWRNCKI 585
            .:  |.:..::|.|:.:....|:||:|   ..::...:||:
  Fly   533 YY--YLIAGLWFGGLTLATVCFLLELLIGYAKIKVTISCKM 571



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.