DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52c and Ir62a

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001033986.1 Gene:Ir62a / 3885628 FlyBaseID:FBgn0053971 Length:606 Species:Drosophila melanogaster


Alignment Length:643 Identity:153/643 - (23%)
Similarity:261/643 - (40%) Gaps:116/643 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFCLGNSSSQILDVTNNSHLDFDYRLF----GLLQRL----------QVEKSYDTLLVYGEDCAI 58
            ||.|..|..||: .|.|....|:..||    |.:.||          .|:.||...|..|..|..
  Fly     6 LFALFLSRYQIV-ATENFDRAFELALFLDRIGRVHRLHAITIVNSLGSVDPSYLDDLHRGLMCNS 69

  Fly    59 PSLFERL-QVPAVLVSSGSTNFDWNFSSLTLILSCNFQDER-------EENYRTLMKLQT----- 110
            .:.|..| |:.|....|...    :||||        |||.       .::...::.||.     
  Fly    70 SNHFYMLPQMTATDKDSSHV----HFSSL--------QDEETIYLVFARDSKDAVIYLQAERARG 122

  Fly   111 ---SRRLILLKGHIKPESVCDFYSK--KEQHNVAMV---KENFYQLEVVYSCRLFQDQNYEKLNL 167
               :|.:.||:.....:.:..|:..  |.|...|:|   ..||||::...:.|:.:   ..:|:.
  Fly   123 RRYTRTMFLLRKQESQKDIKYFFELLWKLQFRSALVVVAARNFYQMDPYPTVRVIR---MRRLSS 184

  Fly   168 FDGKSIYKDQFR-NMHGAPIRTLSDKEPPRTIPYIDSKTGEEKFKGYVGMLISQFVKKVNATMQI 231
            :|...::....| |..|..:|....::.|.|..|.:.:|...:..|..|:||:|.:..:|.||  
  Fly   185 YDPHHVFPPANRKNFRGYRMRLPVQQDVPNTFWYKNRRTKAWELAGLGGILINQLMMHLNVTM-- 247

  Fly   232 REDLIKDDEEVSFVDITNFTS-NDILDIGICEAR-----TLEMSNYDAISYPYLMSSYCFMAPLP 290
              ||.:  .||:...:.|..: .|::..|..|..     ||:.:.....|||..::..|||.||.
  Fly   248 --DLFR--FEVNGSSLLNMAALTDLIVKGKVELSPHLYDTLQSNTSVDYSYPTQVAPRCFMIPLD 308

  Fly   291 DSLPFSDVYMAIVAPSILIMFL-IIFCICSVLIIYIQERSYRSLTIRSVLMNDICLRGFLAQPFP 354
            :.:..|   :.:..|..|.|:| ::|.:..|..:|::.           |:.|......|..|..
  Fly   309 NEISRS---LYVFLPFSLTMWLCLLFVLLVVHFVYVRR-----------LIPDGHFWAILGVPGA 359

  Fly   355 FPRQY-NRK--LKLIFMLVCFSSLISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYTMAI--- 413
            ...:| |||  .:....|:.|...|....|:..|.:.|....|.....|.:::....|.:.:   
  Fly   360 GQVRYGNRKPVRRFSTFLILFGIFILGQTYSTKLTSSLTVTLIRRPDNSLEELFLLPYRILVLPT 424

  Fly   414 NIYEREFLEALNVSLEDVEIY-------DYGKFSKLRSTFNTNYLFPVTALQWFTINEEQKLFKY 471
            ::|      |:..||...|.:       |...||:.|.:.:..|::|::.::|...:.:|:..:.
  Fly   425 DVY------AIVDSLGHAEQFSTKFSCTDAENFSQKRISMHPEYIYPISTIRWRFFDMQQRFLRK 483

  Fly   472 KIFYYCDAFCLNQFDI-LSIPLRRHLPYRDIFEEHMLLQKEFGLTKYWIDQSYRDMIRANLTTFK 535
            |.||: ...|...|.. ..:.:..||  :|.....:|..::.||...|:|..||...|  :...|
  Fly   484 KRFYF-SKICHGSFPYQYQLRVDSHL--KDALHRFLLHVQQAGLHDLWLDTCYRKAHR--MGYLK 543

  Fly   536 DFSPLLENDY------IEVHNLYWVFTMYFVGM-GMGLCFFILEILRPLRYWRNCKIK 586
            |||.|.|.:.      :.::.|...|:::..|| |.|:.|.:     .:|:...|:.|
  Fly   544 DFSTLAELEEKLRLRPLALNLLVPAFSLFLCGMLGSGIAFLV-----EIRHSFGCRQK 596



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.