DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52c and Ir56d

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster


Alignment Length:626 Identity:130/626 - (20%)
Similarity:249/626 - (39%) Gaps:89/626 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SQILDVTNNSHLDFDYRL---FGLLQRLQVEKSYDTLLVYGEDCAIPSLFERLQV----PAV-LV 72
            |:.||:.|....:|.:..   |.:...|.:.:.:...:...:..:.|||......    |.: |.
  Fly    53 SERLDLNNKDSQEFFHNFWTYFPMAPNLIITREHHLGIPMMQFISTPSLVMVFTTGKDDPIMELA 117

  Fly    73 SSGSTNFDWNFSSLTLILSCNFQDEREENYRTLMKLQTSRRLILLKGHIKPESVCDFYSKKEQHN 137
            |.......|..:...|..|...:| .|.|..:|.:         ....||  .|.|:..:|:..|
  Fly   118 SHNQQGIHWLKTIFVLFPSLQSRD-FETNPESLAQ---------FTAEIK--DVYDWVWRKQFIN 170

  Fly   138 VAM--VKENFYQLEVVYSCRLFQDQNYEKLNLFDGKSIYKDQFRNMHGAPIRTLSDKEPPRTIPY 200
            ..:  :|:|.:.|:...:..:     ..|..::..:..:....:||.|..:||....:.||... 
  Fly   171 TFLITIKDNVFILDPYPTPSI-----VNKTGVWQAEEFFHKYAKNMKGYLVRTPILYDMPRVFK- 229

  Fly   201 IDSKTG--EEKF-KGYVGMLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFTSNDILDIGICE 262
            .|..|.  |:.| .|..|.|...|::.||||:......:..|    ::::||..  |::..|:.|
  Fly   230 SDRPTNRYEKNFIHGTSGNLFLGFLEFVNATLMDTSANVTAD----YLNMTNLL--DLVSQGVYE 288

  Fly   263 ARTL-----EMSNYDAISYPYL--MSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCICSV 320
              ||     |::....:||.|.  ::..|.|.|..:..| :|.||.......:.:.:.:|.:...
  Fly   289 --TLIHSFTEITTKFVVSYSYPIGINDCCIMVPYRNQSP-ADQYMHEALQENVWVLISLFTLYIT 350

  Fly   321 LIIYIQERSYRSLTIRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMY---- 381
            :.||:.. ..|...:.:..:..||...:....| ..|....:::.:::|:....::::.:|    
  Fly   351 VAIYLCS-PLRPRDLSAAFLQSICTLTYSVPTF-IIRTPTLRMRYLYILLAIWGIVTSNLYISRM 413

  Fly   382 TAYLQAFLWGPPIEPRLTSFDDVKKS--RYTMAINIYEREFLEALNVS---LEDVEIYDYGKFSK 441
            |:|   |...||:. ::.:..||.::  |..|....|||.....|...   |..|::.|......
  Fly   414 TSY---FTTAPPVR-QINTVQDVVEANLRIKMLAIEYERMAKSPLQYPESYLNQVDLVDKHMLDL 474

  Fly   442 LRSTFNTNYLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDILSIPLRRHLPYRDIFEEHM 506
            .|..|||::.:.|::.:|..:|.:|...:..||...: .|...|..: .||.:....|.:..|::
  Fly   475 HRDPFNTSFGYTVSSDRWRFLNLQQLHLRKPIFRLTE-ICEGPFYHV-FPLHKDSHMRSVMTEYI 537

  Fly   507 LLQKEFGLTKYWIDQSYRDMI---RANLTTFKDFSPLLENDYIEVHNLYWVFTMYFVGMGMGLCF 568
            ::.::.||..:|..:::.:.:   |.::..|.|....|..|:.......|...:...|:.     
  Fly   538 MIAQQAGLMNHWERETFWEAVHLHRIHVHLFDDEPMALSLDFFSSLLRTWTLGLILAGLA----- 597

  Fly   569 FILEI---------LRP-LRYWRNCKIKCEYCYAFLKNFAK 599
            |..|:         .|| :|..|..:       :||:.|.|
  Fly   598 FAAEMKWHEHVTFKRRPVIRITRKPR-------SFLRRFMK 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52cNP_725470.1 None
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 20/115 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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