DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52c and Ir48c

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:601 Identity:119/601 - (19%)
Similarity:220/601 - (36%) Gaps:149/601 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 DCAIPSLFERLQVPAVLVSSGSTNFDWNFSSL-----TLILSCNFQDE----REENYRTLMKLQT 110
            |..|..|...||: .:.:..|..|..::||.|     .:|:|.|..:|    .:|....:::|:.
  Fly    21 DTIISHLSAELQI-KIQIYFGLGNDLYDFSRLDGNYQKIIISHNISEEFKTYHDEPVLIIIRLER 84

  Fly   111 SRRLILLKGHIKPESVCDFYSKKEQHNVAMVKEN-------------------FYQLEVVYSC-- 154
            ...|     ::....|...|....|:|..::.:|                   |.|: ::|:.  
  Fly    85 DLNL-----NLATLDVLRSYLTDRQYNDILLIDNDEENLNSYVDIRKAYWNAGFSQV-LIYNSQQ 143

  Fly   155 RLFQDQNYEKLNLFD---GKSIYKDQFRNMHGAPIRTLSDKEPPRTIPYIDSKTGE-EKFKGYVG 215
            |.:..:.|..|.:..   .:.|.....||:.|.|:|.|...:||......|...|. .::||.:.
  Fly   144 RTWSIKPYPYLQIRPTSLKEYIENRNTRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNRYKGSIV 208

  Fly   216 MLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFTSNDILDIGICEARTLEMSNYDAISYPYLM 280
            .::..|..::|||.|...  .::....|..|.....|:|  :|..|.:..:....| |.|.|..:
  Fly   209 TMLKIFADQLNATFQANP--FREFRRYSTADCVQMVSDD--EIDACGSIFIRTYTY-ATSQPVRL 268

  Fly   281 SSYCFMAPLPDSL--------PFSDVYMAIVAPSILIMFLIIFCICSVLIIYIQERSYRSLTIRS 337
            :....|||..:.:        || |:|:.| ...|:::::      :|:...:....::...:..
  Fly   269 NRVVIMAPFGNPIEKFYYFFRPF-DLYVWI-GTGIIVVYI------AVMGSLLHRWHFKEWNVGQ 325

  Fly   338 VLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMYTAYLQAF----LWGPPIEPRL 398
            .|:  :.::..|.:....|:..:....::.:|:.....|.:.:|.|.|...    |:..|||   
  Fly   326 YLL--LAVQTLLNRELSLPQSSSGSKFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIE--- 385

  Fly   399 TSFDDVKKSRYTMAINIYEREFLEALNVSLEDVEIYDYGKFSKLRSTFNTNYLFPVTALQWFTIN 463
             :..|:|.:.    :||    .|:..|:....|    ||...:||..|             ..:.
  Fly   386 -NLADLKAAN----VNI----LLQTHNIRPNSV----YGSSEELRERF-------------LLVE 424

  Fly   464 EEQKLFKYK----IFYYCDA-----FCLNQFDILSIPLRRHLP-------YR---DIFEEHMLLQ 509
            |.|.|.|..    .:.|.|:     |.|.|...|.   ||.:.       |.   .:.:::.:|:
  Fly   425 ESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLR---RRRMKKLSNPVGYTWAVQVIKQNWVLE 486

  Fly   510 K----------EFGLTKYWIDQSYRDMIRANLTTF-----KDFSPLLENDYIEVHNLYWVFTMYF 559
            |          |.||....:|..:...::|....|     :...||...|.:          |..
  Fly   487 KHYNDHVQRFFETGLQNKLVDDVHELAVKAGFLHFFPTQTQTIEPLRLEDIV----------MAA 541

  Fly   560 VGMGMG-----LCFFI 570
            :.:|.|     :||.:
  Fly   542 MVLGGGHALAVICFLV 557



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C043
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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