DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52c and Ir20a

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster


Alignment Length:606 Identity:131/606 - (21%)
Similarity:263/606 - (43%) Gaps:111/606 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSQILDVTNNSHLDFDYRLFGLLQRLQVEKSYDTLLVY---GEDCAIPSLFER-LQVPAVLVSSG 75
            |:::||            |:||:....:...:.||:.:   |.||:...|::| |.....:|...
  Fly    12 SAELLD------------LYGLVVHFLLSGEHTTLVYFNPAGLDCSWGVLWQRNLTAHPQIVWQR 64

  Fly    76 STNFD---WNFSSLTLILSCNFQDER-----EENYRTLMKLQTSRRLIL-LKGHIKPESV----- 126
            :.::.   :.|::..|:|:|...|.|     |....:|..|:|..||:: :.|   |:.|     
  Fly    65 NYSYPDLYYQFNAKLLVLACLPMDSRAAIQLEILANSLSHLRTVVRLLIEVAG---PDQVTLARQ 126

  Fly   127 -CDFYSKKEQHNVAMVKENFYQLEVVYSCRLFQDQNYEK----LNLFDGKSIYKDQFRNMHGAPI 186
             ..|..::...:|.:...:::...::||.|.|  .::|.    :::..|..::..:..::.|..:
  Fly   127 YLSFCLRRSMLHVELYFRDYHHSLILYSFRAF--PSFELVMRWISVGQGVKLFLHKLDDLRGHRL 189

  Fly   187 RTLSDKEPPRTIPYIDSKTGEEKFKGYVGMLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFT 251
            |.:.|..||.|..|.|:: |:.:..||:...::.|..::||.:::.....:.........:..::
  Fly   190 RVIPDLSPPNTFFYRDAR-GDNQVTGYLWDFLATFAGRLNAGLEVVRPSWRAGSASDSSYMLEYS 253

  Fly   252 SNDILDIGICEARTLEMSNYDAI---SYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLI 313
            :..::|:|: ....:...|..||   :||.|:||:|.|.|:...|...|::..||.|::.:..|:
  Fly   254 AKGLIDVGL-TTTLITKWNLWAIHQYTYPLLVSSWCTMLPVEKPLATPDLFGRIVCPTLAMTLLL 317

  Fly   314 IFCICSVLIIYIQERSYRSLTIRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLIST 378
            |     :|:.::..|..|.||   .|.|        ::|   .|.....|.|:.:..|.:.|:|.
  Fly   318 I-----ILVTWLVFRQLRCLT---RLKN--------SRP---ARIVPHLLTLLLLTTCSAQLLSL 363

  Fly   379 TMYTAYLQAFLWGPPIEPRLTSFDDVK--------------------KSRYTMAINIYEREFLEA 423
            .::          ||...|:.||:|:.                    ::||.....:.:      
  Fly   364 LIF----------PPYHVRIASFEDLLRGDQKILGMRNEFYNFDGAFRARYAGVFYLID------ 412

  Fly   424 LNVSLEDVEIYDYGKFSKLRSTFNTNYLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDIL 488
                 :..|:||      ||:.|||.:.:.:..::|..|..:|:.|...:|.:....|...|...
  Fly   413 -----DPNELYD------LRNHFNTTWAYTMPYIKWLVIKTQQRHFSKPLFRWSKDLCFFDFMPT 466

  Fly   489 SIPLRRHLPYRDIFEEHMLLQKEFGLTKYWIDQSYRDMIRANLTTFKDFSPLLENDYIEVHNLYW 553
            |:.:.....|.:..::......:.||.|:||.:|:.|||:|...:.||:|.|.....:.:.:|..
  Fly   467 SVIVAPDSIYWESIKDFTFRIHQAGLMKHWIRKSFYDMIKAGKMSIKDYSDLETLKPLNIGDLEI 531

  Fly   554 VFTMYFVGMGMGLCFFILEIL 574
            |:.:....:.:....||:|:|
  Fly   532 VWRVCGAAIAVASAIFIMELL 552



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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