DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52c and Ir10a

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster


Alignment Length:675 Identity:130/675 - (19%)
Similarity:249/675 - (36%) Gaps:176/675 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IIILFCLGNSSSQILDVTNNSHLDFDYRLFGLLQRLQVEKSYDTLLVYGEDCAIPSLFERLQVPA 69
            :.:||.|   ..:.|::|         ||.|||    ||.:.|          :|.|       .
  Fly     7 VFLLFML---DLKTLNLT---------RLNGLL----VEPTRD----------LPQL-------E 38

  Fly    70 VLVSSGSTNFD-------WNFSSLTLILS-CNFQDER---EENY--RTLMKLQTSRRLILLKGHI 121
            :.:.:||.:.|       |......:.|| ..:|:.|   ::.:  |.|:.:.:..:|:..:|..
  Fly    39 LWLRAGSDHQDAENPYVQWFLLRTEIPLSIVTYQENRYWMDDPFGRRNLVLVMSLDQLLTNRGAA 103

  Fly   122 KP--ESVCDFYSKKEQHNVAMVKENFYQLEVVYSCRLFQDQN--YEKLNLF-DGKSIY------- 174
            .|  ::...||...:|.......|   ||.:..|||....|:  |.:..|. ||..||       
  Fly   104 APIQKASTFFYILADQDKDLSADE---QLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRRD 165

  Fly   175 ----------------KDQFRNMHGAPIRTLSDKEPPRTIPYIDSKTGEEKFKGYVGMLISQFVK 223
                            |..||:|.|.|:| :.......|.|..|.:||.......|..|::|.::
  Fly   166 SAFGRLVRYYGSETLDKLLFRDMAGYPLR-IQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLR 229

  Fly   224 -KVNATMQIRE--------------------DLIKDDEEVSFVDITNFTSNDILDIGICEARTLE 267
             ::|.||.:::                    .:|||..::.   :|.|...|.|   :.:.....
  Fly   230 ERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDIC---LTGFFVKDYL---VQQYMDFT 288

  Fly   268 MSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCICSVLIIYIQERSYRS 332
            ::.||        ...|...|....:|.|.:.:..|...|.:.|::....|:::.:.::   ..:
  Fly   289 VAVYD--------DELCIYVPKASRIPQSILPIFAVGYDIWLGFVLTAFACALIWLTLR---VIN 342

  Fly   333 LTIRSVLMND----------------ICLRGFLAQPFPFPRQYNRKL---KLIFMLVCFSSLIST 378
            |.:|.|.:.:                :.:|..|:.   .|..|..::   .|..:.|.|.::..:
  Fly   343 LKLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSH---LPASYAERMFIGTLCLVSVIFGAIFES 404

  Fly   379 TMYTAYLQAFLWGPPIEPRLTSFDDVKKS------RY-TMAINIYERE---FLEALNVSL---ED 430
            ::.|.|:.     |.....:.:..::.:|      :| :||.:::..|   ...:||..|   .|
  Fly   405 SLATVYIH-----PLYYKDINTMQELDESGLKVVYKYSSMADDLFFSETSPLFASLNKKLSWNRD 464

  Fly   431 VEIYDYGKFSKLRSTFN-TNYLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDILSIPLRR 494
            :......:.::.|:... :.|...:.....||:     |.|..:...|.     ::..:|..:.|
  Fly   465 LRADVIDEVARFRNKAGVSRYTSLILESSHFTL-----LRKIWVVPECP-----KYYTISYVMPR 519

  Fly   495 HLPYRDIFEEHMLLQKEFGLTKYWI--DQSYRDM-IRANLTTFKDFSPLLENDYIEVHNLYWVFT 556
            ..|:.|.....:|.....||...||  ::|:.|: :|:|:......|.|:.  .:.:.:|...|.
  Fly   520 DSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVR--VLTIGDLQLAFY 582

  Fly   557 MYFVGMGMGLCFFILEILRPLRYWR 581
            :...|..:....|:.|..|    |:
  Fly   583 VVIGGNLLAFLGFLAEHFR----WK 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52cNP_725470.1 None
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 15/87 (17%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 15/101 (15%)
Lig_chan 319..587 CDD:278489 49/290 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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