DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52c and Ir7c

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster


Alignment Length:567 Identity:115/567 - (20%)
Similarity:195/567 - (34%) Gaps:152/567 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LILSCNFQDEREENYRTLMKLQTSRRLILLKGHIKPESVCDFYSKKEQHNVAMVKENFY------ 146
            |::....:|:..|:.:.:.:...:..::.:...::.:.....|:             :|      
  Fly   124 LVIYTGLEDQPMESLKIMFRRLLNMYVLNVNVFLQRDGTVHLYT-------------YYPYGPHH 175

  Fly   147 ---QLEVVYSCRLFQDQNYEKLNLFDGKSIYKDQFRNMHGAPIRTLSDKEPPRTIPYIDSKT-GE 207
               .|.|.|:.  |||...........|.::..:..||||..:...:.:..|..|...|.|| |.
  Fly   176 CQSSLPVYYTA--FQDLAAPANGFGLTKPLFPRKLTNMHGCEMVVATFEHRPYVIIEDDPKTPGG 238

  Fly   208 EKFKGYVGMLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFTSNDILDIGICEARTLEMSNYD 272
            ....|..|::.....:::|.|:::.|.  ||......:...|||       ||.:.......|..
  Fly   239 RSIHGIEGLIFRSLAERMNFTIKLVEQ--KDKNRGEILPDGNFT-------GILKMMVDGEVNLT 294

  Fly   273 AISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPS---------ILIMFLIIFCICSVLIIYIQER 328
            .:.:.|..:....|.|   |..::...:.:|.||         :...|..|...| :|:      
  Fly   295 FVCFMYSKARSDLMLP---STSYTSFPIVLVVPSGGSISPMGRLTRPFRYIIWSC-ILV------ 349

  Fly   329 SYRSLTIRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMYTAYLQAFLWGPP 393
               ||....||   |||....|.|........|:.:|.||.:..|.|....:|            
  Fly   350 ---SLIFGFVL---ICLLKITALPGLRNLVLGRRNRLPFMGMWASLLGGLALY------------ 396

  Fly   394 IEPRLTSFDDVKKSRYTMAINIYEREFLEA-----LNVSLEDVEI--------------YDYGKF 439
             .|: .:|     :||.:.:.:.:...|.|     |.:.|:|||:              |::...
  Fly   397 -NPQ-RNF-----ARYILVMWLLQTLILRAAYTGQLYLLLQDVEMRSPIKSLSEVLAKDYEFRIL 454

  Fly   440 SKLRSTFNTNYLFPVTALQWFTINEEQKLFKYK------IFYYCDAFCLNQFDILSIPLRRHL-- 496
            ..||:.|..:  .|.|... ..::.|:.|::.:      |........:||||..|.|.:|||  
  Fly   455 PALRTIFKDS--MPTTNFH-AVLSLEESLYRLRDEDDPGITVALLQPTVNQFDFRSGPNKRHLTV 516

  Fly   497 --------PYRDIFEEHMLLQKEF----------GLT----KYWIDQSYRDMIRANLTTFKDFSP 539
                    |.......|...::..          |:.    |.::|:..|...|.|         
  Fly   517 LPDPLMTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARYRKMYMDRIKRVSKRRN--------- 572

  Fly   540 LLENDYIEVHNLYWVFT----MYFVGMGMGLCFFILEIL----RPLR 578
             ||...:.:..|..:|.    :|.|    .|..||||||    |.||
  Fly   573 -LEPKPLSIWRLSGIFVCCAGLYLV----ALIVFILEILTTNHRRLR 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir52cNP_725470.1 None
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 18/70 (26%)
Lig_chan 343..593 CDD:278489 59/294 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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