DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir52c and Ir41a

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster


Alignment Length:652 Identity:125/652 - (19%)
Similarity:238/652 - (36%) Gaps:162/652 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NSSSQILDV------TNNSHLDFDYRLFGLLQRLQVEKSYDTLLVYGEDC-AIPSLFERLQVPAV 70
            |....|:|.      ..|.||..|..:..::..::|... :|.:|:.:|. ...:.|.:..|.::
  Fly    56 NGGHYIIDTGLKKKELQNKHLFLDELVIKIIISIEVTHC-ETFVVFDKDIDRFVNAFNKASVYSI 119

  Fly    71 LVSSGSTNFDWNFSSLTLILSCNFQDEREENYRTLMKLQTSRRLILLKGHIKPESVCDFYSKKEQ 135
                      |. |.....:..:..:|..|:.....:.|.: .|.:::.|....|    :..|..
  Fly   120 ----------WR-SLHNKFVFAHIANESPESRNHFFEDQPN-ILFVVRDHSSASS----FDIKTN 168

  Fly   136 HNVAMVKENFYQLEVVYSCRLFQDQNYEKLNLFDGKSIYKDQFRNMHGAPIRTLSDKEPPRTIPY 200
            ..|....||..|: ::....|..:|.::     .|||::.|:..|:.|..:.......||.|:..
  Fly   169 KFVGRKAENPSQM-ILVDRYLASEQRFQ-----FGKSLFADKLNNLQGREVIIAGFDYPPYTVIK 227

  Fly   201 IDSKT--------GEEKFK-----GYVGMLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFTS 252
            .:..|        ||..||     |....::..|.::.|.|:||......|..:|    ..|.:.
  Fly   228 HNMSTNAQDMGVSGESDFKNVYIDGTETRIVLNFCEQFNCTIQIDSSAANDWGKV----YPNMSG 288

  Fly   253 NDILDIGICEARTLEM------SNYDAISYPYL-MSSY-------CFMAPLPDSL--------PF 295
            :..|  |:...|..::      |.|:  .|.|| :|.|       | :.|.|..|        ||
  Fly   289 DGAL--GMLINRKADICIGAMYSWYE--DYTYLDLSMYLVRSGITC-LVPAPLRLTSWYLPLEPF 348

  Fly   296 SDVYMAIVAPSILIMFLIIFCICS----VLIIYIQERS------YRS--LTIRSVLMNDIC--LR 346
            .:...|          .|:.|:|:    :::.|..|::      ||.  .|..|.   .:|  .:
  Fly   349 KETLWA----------AILLCLCAEATGLVLAYKSEQALYVLPGYREGWWTCTSF---GVCTTFK 400

  Fly   347 GFLAQPFPFPRQYNRKLKLIFMLVCF-SSLISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYT 410
            .|::|. ...:.|:..:: :.:..|| :.||.|::|...|.:.|..|.::....:...::..|..
  Fly   401 LFISQS-GNSKAYSLTVR-VLLFACFLNDLIITSIYGGGLASILTIPSMDEAADTVTRLRFHRLQ 463

  Fly   411 MAINIYEREFLEALNVS----LEDVEIYDYGKFS-----------KLRSTFNT-----------N 449
            .|.|  ...::.|:..|    ::|: :|::..:|           .:|..|..           |
  Fly   464 WAAN--SEAWVSAIRASDEALVKDI-LYNFHIYSDDELLRLAQDQHMRIGFTVERLPFGHFAIGN 525

  Fly   450 YLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDILSIPLRRHLPYRDIFEEHMLLQKEFGL 514
            ||.| .|:....|.::...|:|.:.:              :|  |..|..|.....:......|.
  Fly   526 YLGP-QAIDQLVIMKDDIYFQYTVAF--------------VP--RLWPLLDKLNTLIYSWHSSGF 573

  Fly   515 TKYW--------IDQSYRDMIRANLTTFKDFSPLLENDYIEVHNLYWVFTMYFVGMGMGLCFFIL 571
            .|||        ::...:..::..:|..||..|:    .:.:.|......::.:|..:....|:|
  Fly   574 DKYWEYRVVADNLNLKIQQQVQETMTGTKDIGPV----PLGMSNFAGFIIVWILGSAIATLTFLL 634

  Fly   572 EI 573
            |:
  Fly   635 EL 636



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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