DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir52c and Ir52b

DIOPT Version :9

Sequence 1:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster


Alignment Length:597 Identity:248/597 - (41%)
Similarity:370/597 - (61%) Gaps:17/597 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVWLIIILFCLGNSSSQILDVTNNSHLDFDYRLFGLLQRLQVEKSYDTLLVYGEDCAIPSLFERL 65
            |.||:|:|..||..::.|.|::..:....|..|..||.:|:.|:.||||||||:||...|:.:.:
  Fly     1 MTWLVILLCFLGYMAAHIADISVQNQSLMDNELINLLLKLRNEEFYDTLLVYGKDCEFHSVIKNV 65

  Fly    66 QVPAVLVSSGSTNFDWNFSSLTLILSCNFQDEREENYRTLMKLQTSRRLILLKGHIKPESVCDFY 130
            .|..||||. |.||:||||||||||||....:......|.:|||.:|||:|||...:|.::|:.|
  Fly    66 DVAVVLVSD-SMNFEWNFSSLTLILSCGPDIDNGGPNSTSIKLQRNRRLVLLKEDFQPSNICNIY 129

  Fly   131 SKKEQHNVAMVKENFYQLEVVYSCRLFQDQNYEKLNLFDGKSIYKDQFRNMHGAPIRTLSDKEPP 195
            ::|||:|:|:|:|||.:.:.:|:||.|||.|.:::||...|.|:.:||:||.|..||.:.|..||
  Fly   130 TQKEQYNIALVRENFTKSKSIYTCRYFQDPNVDEVNLSGTKPIFIEQFQNMKGKAIRIVPDLLPP 194

  Fly   196 RTIPYIDSKTGEEKFKGYVGMLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFTSNDILDIGI 260
            |.:.|.|:..||.|..|||..||:.|.:|||||:|:  |.:|  ...|..:|:....:|.||:||
  Fly   195 RVMLYQDANDGELKMIGYVANLITNFAQKVNATLQL--DFLK--PSTSITEISRMAKDDELDMGI 255

  Fly   261 CEARTLEMSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCICSVLIIYI 325
            ....:|..||.:..|||||::|||.|..:|...|::.||..||.|.:|.:..::|.:.|||:||.
  Fly   256 TLEASLNTSNLETSSYPYLLTSYCLMVQVPAKFPYNLVYALIVDPLVLGIIFVLFLLLSVLLIYS 320

  Fly   326 QERSYRSLTIRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLISTTMYTAYLQAFLW 390
            |:.|::.|::.::|:||..|||.|.|.||||...::||:|||.::||:|::.||||.||||:|..
  Fly   321 QKMSWQDLSVANILLNDKSLRGLLGQSFPFPLNASKKLRLIFTILCFASIMLTTMYEAYLQSFFT 385

  Fly   391 GPPIEPRLTSFDDVKKSRYTMAINIYEREFLEALN------VSLEDVEIYD-YGKFSKLRSTFNT 448
            .||.||.:.||.||......:|::..|...|...|      :.::|:||:| ..:..:||..||.
  Fly   386 NPPSEPEICSFQDVGSYNRRIAMSALEVNGLIKTNNSHFREIRMDDLEIFDNMPECYELRDAFNL 450

  Fly   449 NYLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDILSIPLRRHLPYRDIFEEHMLLQKEFG 513
            :|.:.||..:|.:..|:|.|||..:||:....|.::...||:|||||||||.:|:|||:.|.|||
  Fly   451 SYNYVVTGDRWRSYAEQQTLFKEPVFYFARDLCFSRLIFLSVPLRRHLPYRHLFDEHMMQQHEFG 515

  Fly   514 LTKYWIDQSYRDMIRANLTTFKDFS-PLLENDYIEVHNLYWVFTMYFVGMGMGLCFFILEI-LRP 576
            ...||:..|:.||:|..||:.||.| ||.....:.:.::.|:..:|...:.:.:..|:||| :..
  Fly   516 FVNYWMSHSFFDMVRLGLTSLKDLSRPLAYTPSLLMDDISWIMKIYLAAIVLCVFCFLLEIGVDK 580

  Fly   577 LRYW---RNCKI 585
            .:.|   ||.:|
  Fly   581 WKRWMKFRNLQI 592



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469092
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C043
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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