DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant9 and galnt2

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:XP_009305623.1 Gene:galnt2 / 570248 ZFINID:ZDB-GENE-041111-110 Length:565 Species:Danio rerio


Alignment Length:586 Identity:230/586 - (39%)
Similarity:316/586 - (53%) Gaps:90/586 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 GINGNVIGGGGQKQAHDEADIPPTVGKHKADLQAERMRKKAAEQPKKKPQEDSKKVIDPPANFEE 144
            |||.|.|      |.|..||                                     |...:.|.
Zfish    37 GINSNRI------QTHSNAD-------------------------------------DKDHSLES 58

  Fly   145 NPGELGKPVRLPKEMSD-----EMKKAVDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARY 204
            .|  ||| ||......|     .:.:...|.:.:|.|||..||.:.:.|.:||.|...|:.: ::
Zfish    59 LP--LGK-VRWQDYDQDLYVGATVVRPGQDPYARNKFNQVESDKLRMDRNIPDTRHDHCRHK-QW 119

  Fly   205 LTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLED--YFAAY 267
            .|:||.:.|:|.|||||.:.|||||.|||.:||.||:.:|||||||||.|      ||  .....
Zfish   120 RTDLPASSVVITFHNEARSALLRTVISVLKKSPPHLVKEIILVDDYSDNP------EDGALLGKI 178

  Fly   268 PKVQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVCPVIDV 332
            .||:::|..:||||:|:|:.||:.|.:.|||:|||||||.|.||||||:|:|.:.|.||.|:|||
Zfish   179 EKVRVLRNDRREGLMRSRVRGADAATASVLTFLDSHCECNEHWLEPLLERVAEDKTRVVSPIIDV 243

  Fly   333 ISDETLEYHYRDSGGVNV---GGFDWNLQFSW-HPVPERERKRHNSTAEPVYSPTMAGGLFSIDR 393
            |:.:..:|     .|.:.   |||||||.|.| :...|:.|.|..:...|:.:|.:|||||.:|:
Zfish   244 INMDNFQY-----VGASADLKGGFDWNLVFKWDYMTLEQRRARQGNPIAPIKTPMIAGGLFVMDK 303

  Fly   394 EFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSPYKWRSGV-NVLKKN 457
            ::|:.||.||...|:|||||||:||:.|.|||:|||:|||.|||:|||:.||.:..|. .|..:|
Zfish   304 DYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARN 368

  Fly   458 SVRLAEVWMDEYSQYYYHRIGNDKG-DWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFIPG-DSV 520
            :.|.||||||::..:||..:.:.:. .:|::..|.:::..|.||.|||||:|:||||.:|. ..:
Zfish   369 TRRAAEVWMDDFKNFYYAAVPSARNVPYGNIQSRLEMKKRLGCKPFKWYLENVYPELRVPDHQDI 433

  Fly   521 AHGEIRNLGYGGRTCLDAPAGKKHQKKAVGTYPCHRQGGNQY------WMLSKAGEIRRDDSCLD 579
            |.|.::.    |:.|||...  ......||.|.||..||||.      |.|:|...::..|.||.
Zfish   434 AFGALQQ----GQNCLDTLG--HFADGVVGVYECHNAGGNQVSNKTQEWALTKDKSVKHMDLCLT 492

  Fly   580 Y----AGKDVTLFGCHGGKGNQFWTYRENTKQLHHGTSGKCL-AISESKDKLLMEECSASLSRQQ 639
            .    ||..:.|.||......|.|...:|..:|.|..|..|| :.|.....|.:|.||.||: ||
Zfish   493 VVDRTAGSQIKLQGCRENDTRQKWEQIDNNTKLRHVGSNLCLDSRSARSGGLTVEVCSPSLT-QQ 556

  Fly   640 W 640
            |
Zfish   557 W 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 139/277 (50%)
pp-GalNAc-T 213..510 CDD:133004 148/304 (49%)
Ricin_B_lectin 521..640 CDD:279046 42/129 (33%)
RICIN 523..642 CDD:238092 43/129 (33%)
galnt2XP_009305623.1 pp-GalNAc-T 127..422 CDD:133004 148/305 (49%)
Glyco_tranf_2_3 127..351 CDD:290369 121/234 (52%)
Ricin_B_lectin 434..557 CDD:279046 42/129 (33%)
RICIN 444..559 CDD:238092 41/117 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.