DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant9 and Pgant6

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:NP_001261342.1 Gene:Pgant6 / 38346 FlyBaseID:FBgn0035375 Length:666 Species:Drosophila melanogaster


Alignment Length:630 Identity:240/630 - (38%)
Similarity:336/630 - (53%) Gaps:71/630 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EPAGEDFGINGNV-IGGGGQKQAH----DEADIPPTVGKHKADLQAERMRKK------AAEQPKK 126
            ||..|..|::|:| :.....||..    .|.|........|.| :.|.:.::      |.::|::
  Fly    45 EPVPEKAGLSGDVKVKVPAIKQPEPQKPQEPDFEEDPELQKID-EPEPVEEEVDNPHPADDEPQQ 108

  Fly   127 KPQEDSKKVIDPPANFEEN---------------PGELGKPVRLPKEMSDEMKKAVDDGWTKNAF 176
            :|||:.:......|:.:::               .||.||...|..|...:::|.:.   .:|.|
  Fly   109 QPQEELQMAAPADASVKKDWHDYTFMEKDAKRVGLGEGGKASTLDDESQRDLEKRMS---LENGF 170

  Fly   177 NQYVSDLISVHRTLPDPRDAWCKDEARYLTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLI 241
            |..:||.|||:|::||.|...|: :..|:..||...|||.|:||..:||:|:|||:::|||..|:
  Fly   171 NALLSDSISVNRSVPDIRHPLCR-KKEYVAKLPTVSVIIIFYNEYLSVLMRSVHSLINRSPPELM 234

  Fly   242 GKIILVDDYSDMPHLKRQLEDYFAAYPK-VQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCE 305
            .:||||||:||..:|.::||.|.|.:.| |:::|..:|.|||.||..||.:|.:.||.:||||.|
  Fly   235 KEIILVDDHSDREYLGKELETYIAEHFKWVRVVRLPRRTGLIGARAAGARNATAEVLIFLDSHVE 299

  Fly   306 CTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWNLQFSWHPVPERERK 370
            ....||.|||:.||.|..|.|||.||||......|..:|.|.  .|.|||...:...|:...:.|
  Fly   300 ANYNWLPPLLEPIALNKRTAVCPFIDVIDHTNFHYRAQDEGA--RGAFDWEFFYKRLPLLPEDLK 362

  Fly   371 RHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHV 435
            .   .|:|..||.||||||:|.||||..||.||.|.||||||..|||||.|||||.:...|||.:
  Fly   363 H---PADPFKSPIMAGGLFAISREFFWELGGYDEGLDIWGGEQYELSFKIWMCGGEMYDAPCSRI 424

  Fly   436 GHIFR-----KRSPYKWRSGVNVLKKNSVRLAEVWMDEYSQYYY-HRIG-NDKGDWGDVSDRRKL 493
            |||:|     :.||   |.| :.|.||..|:||||||||..|.| |..| .:..|.||:::::.:
  Fly   425 GHIYRGPRNHQPSP---RKG-DYLHKNYKRVAEVWMDEYKNYLYSHGDGLYESVDPGDLTEQKAI 485

  Fly   494 RNDLKCKSFKWYLDNI-------YPELFIPGDSVAHGEIRNLGYGGRTCLDAPAGKKHQKKAVGT 551
            |..|.||||||:::.:       ||.:..|  |.|.|.::|:| ....|||....|||.|  :|.
  Fly   486 RTKLNCKSFKWFMEEVAFDLMKTYPPVDPP--SYAMGALQNVG-NQNLCLDTLGRKKHNK--MGM 545

  Fly   552 YPC----HRQGGNQYWMLS--KAGEIRRDDSCLDY----AGKDVTLFGCHGGKGNQFWTYRENTK 606
            |.|    ......|:|.||  :...:||...|||.    |...|.|:.||...|||:|.|....|
  Fly   546 YACADNIKTPQRTQFWELSWKRDLRLRRKKECLDVQIWDANAPVWLWDCHSQGGNQYWYYDYRHK 610

  Fly   607 QLHHGTSG-KCLAISESKDKLLMEECSASLSRQQWTLENYDSSKL 650
            ||.|||.| :||.:.....:::..:|......|||...:::.:.|
  Fly   611 QLKHGTEGRRCLELLPFSQEVVANKCDTDNRFQQWNFGSFNKTAL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 137/277 (49%)
pp-GalNAc-T 213..510 CDD:133004 147/311 (47%)
Ricin_B_lectin 521..640 CDD:279046 44/129 (34%)
RICIN 523..642 CDD:238092 45/129 (35%)
Pgant6NP_001261342.1 BcsA 199..>413 CDD:224136 108/218 (50%)
pp-GalNAc-T 205..502 CDD:133004 147/305 (48%)
RICIN 520..647 CDD:238092 45/129 (35%)
Ricin_B_lectin 520..645 CDD:279046 43/127 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457024
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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