DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant9 and GALNT18

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:NP_940918.2 Gene:GALNT18 / 374378 HGNCID:30488 Length:607 Species:Homo sapiens


Alignment Length:569 Identity:183/569 - (32%)
Similarity:292/569 - (51%) Gaps:64/569 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 PKKKPQE---DSKKVI---------------DPPANFEENPGELGKPVRL----PKEMSDEMKKA 166
            |.||.:|   |:.|:|               :.||..||...|......|    .:|:|.|.::.
Human    48 PDKKLEEDKGDTLKIIERLDHLENVIKQHIQEAPAKPEEAEAEPFTDSSLFAHWGQELSPEGRRV 112

  Fly   167 VDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARYLTNLPKTDVIICFHNEAWTVLLRTVHS 231
            ....:....:|.|:||.:.:.|.|||.|.:.|:: ..:..:||:..::..|.|||.:||||::||
Human   113 ALKQFQYYGYNAYLSDRLPLDRPLPDLRPSGCRN-LSFPDSLPEVSIVFIFVNEALSVLLRSIHS 176

  Fly   232 VLDRSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAYPK-----VQIIRGQKREGLIRARILGANH 291
            .::|:|.||:.:||||||.|....||.:|.:|......     ::::|..|:|||||:|:.|...
Human   177 AMERTPPHLLKEIILVDDNSSNEELKEKLTEYVDKVNSQKPGFIKVVRHSKQEGLIRSRVSGWRA 241

  Fly   292 AKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWN 356
            |.:||:...|:|.|...||.||:|.||..|...::.|..|.|..:..|.   :...:...||||.
Human   242 ATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRIISPSFDNIKYDNFEI---EEYPLAAQGFDWE 303

  Fly   357 LQFSWHPVPERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTW 421
            |...:...|:...|..|||| |:.||.:. |.|.:||::|..:|..|.|.:::||||:||..:.|
Human   304 LWCRYLNPPKAWWKLENSTA-PIRSPALI-GCFIVDRQYFQEIGLLDEGMEVYGGENVELGIRVW 366

  Fly   422 MCGGTLEIVPCSHVGHIFRKRSPYKWRSGVNVLKKNSVRLAEVWMDEYSQYYYHRIG---NDKG- 482
            .|||::|::|||.:.||.|...||......:| ::|::|:|||||||:..:.|....   .|.| 
Human   367 QCGGSVEVLPCSRIAHIERAHKPYTEDLTAHV-RRNALRVAEVWMDEFKSHVYMAWNIPQEDSGI 430

  Fly   483 DWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFIPGDSVAHGEIRNLGYGGRTCLDAPAGKKHQKK 547
            |.||::.|:.||..|:||:|:|||.::|||:.:..|.:|:|.::| ......|||  .|...:..
Human   431 DIGDITARKALRKQLQCKTFRWYLVSVYPEMRMYSDIIAYGVLQN-SLKTDLCLD--QGPDTENV 492

  Fly   548 AVGTYPCH-RQGGNQYWMLSK-------AGEIRRDDS-CLDYAGKDVTLFGCHGGKGNQF---WT 600
            .: .|.|| ....|.|:..|:       :..:..||: ||........|..|...|..:.   |.
Human   493 PI-MYICHGMTPQNVYYTSSQQIHVGILSPTVDDDDNRCLVDVNSRPRLIECSYAKAKRMKLHWQ 556

  Fly   601 YRENTKQLHHGTSGKCLAISESKD-----KLLMEECSASLSRQQWTLEN 644
            :.:. ..:.:..|.:||.:.|:.|     :|::::||.    |.|::.|
Human   557 FSQG-GPIQNRKSKRCLELQENSDLEFGFQLVLQKCSG----QHWSITN 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 106/275 (39%)
pp-GalNAc-T 213..510 CDD:133004 119/305 (39%)
Ricin_B_lectin 521..640 CDD:279046 30/135 (22%)
RICIN 523..642 CDD:238092 30/135 (22%)
GALNT18NP_940918.2 Catalytic subdomain A 153..267 47/113 (42%)
pp-GalNAc-T 157..458 CDD:133004 119/306 (39%)
Catalytic subdomain B 324..385 27/61 (44%)
RICIN 471..598 CDD:238092 30/135 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152464
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.