DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant9 and Pgant4

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:NP_001137779.1 Gene:Pgant4 / 261610 FlyBaseID:FBgn0051956 Length:644 Species:Drosophila melanogaster


Alignment Length:614 Identity:233/614 - (37%)
Similarity:306/614 - (49%) Gaps:102/614 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LQAERMRKKAAE---------------------QPKKK----PQEDSKKVIDPP----------- 139
            |..||..|.|||                     .|.:|    |.:|...|:|.|           
  Fly    31 LVVERRMKNAAELTEQLDPNGDPITPVFRAANIHPTRKAPRPPFQDRNSVVDIPRSDKLQGFRLP 95

  Fly   140 ------------ANFEENP-----GELGKPVRLPKEMSDEMKKAVDDGWTKNAFNQYVSDLISVH 187
                        |..|.:.     ||.|..|::  |..|| |:...:.:..|.||..:||.|||:
  Fly    96 EPKGERKDWHDYAAMEADRKRSGFGEHGVAVKI--ENPDE-KQLEKEHYEMNGFNGLISDRISVN 157

  Fly   188 RTLPDPRDAWCKDEARYLTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSD 252
            |::||.|...||.. :||..||...||..|.||.:..|||:::||::|:|..|:.:|:||||.|:
  Fly   158 RSVPDLRLEACKTR-KYLAKLPNISVIFIFFNEHFNTLLRSIYSVINRTPPELLKQIVLVDDGSE 221

  Fly   253 MPHLKRQLEDYFAA-YPK-VQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCECTEGWLEPLL 315
            ...||:.|:||... :|. |.|:|..:|:|||.|||.||..|...|:.:.|||.|....||.||:
  Fly   222 WDVLKQPLDDYVQQHFPHLVTIVRNPERQGLIGARIAGAKVAVGQVMVFFDSHIEVNYNWLPPLI 286

  Fly   316 DRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWNLQFSWHPV-PERERKRHNSTAEPV 379
            :.||.|.....||::|.||.|...|...:..|.. |||||.:.:...|| ||....:    :.|.
  Fly   287 EPIAINPKISTCPMVDTISHEDFSYFSGNKDGAR-GGFDWKMLYKQLPVLPEDALDK----SMPY 346

  Fly   380 YSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSP 444
            .||.|.||||:|:.:||..||.||...||||||..|||||.|||||.|..||||.|.|||  |.|
  Fly   347 RSPVMMGGLFAINTDFFWDLGGYDDQLDIWGGEQYELSFKIWMCGGMLLDVPCSRVAHIF--RGP 409

  Fly   445 YKWRS---GVNVLKKNSVRLAEVWMDEYSQYYYHRIGN--DKGDWGDVSDRRKLRNDLKCKSFKW 504
            .|.|.   |.|.:.||..|:||||||||.||.|.|...  |..|.||::.:|.:|..||||||.|
  Fly   410 MKPRGNPRGHNFVAKNHKRVAEVWMDEYKQYVYKRDPKTYDNLDAGDLTRQRGVRERLKCKSFHW 474

  Fly   505 YLDNIYPEL---FIPGD--SVAHGEIRNLG---YGGRTCLDAPAGKKHQKKAVGTYPC-----HR 556
            ::..:.|:.   |.|.:  |.|.|.|:|:.   |    |||...  |..::|||.:.|     |.
  Fly   475 FMTEVAPDFLVKFPPVEPPSYAAGIIQNVANPVY----CLDNMG--KSTEEAVGMFSCADNRTHP 533

  Fly   557 QGGNQYWMLSKAGEIRR---DDSCLDY----AGKDVTLFGCHGGKGNQFWTYRENTKQLHHGTSG 614
            | .||:|.||...::|.   |..|||.    ....|.::.||...|||||.|...|::|.||.:.
  Fly   534 Q-PNQFWELSIFRDLRMKGFDSVCLDVHEGPPNATVWMWSCHSQGGNQFWYYDRQTQRLVHGENN 597

  Fly   615 K-CLA--ISESKDKLLMEECSASLSRQQW 640
            | ||.  :.....|::...|.....||:|
  Fly   598 KRCLEGFVENGIAKVVANSCENGNDRQRW 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 130/276 (47%)
pp-GalNAc-T 213..510 CDD:133004 141/304 (46%)
Ricin_B_lectin 521..640 CDD:279046 45/136 (33%)
RICIN 523..642 CDD:238092 45/136 (33%)
Pgant4NP_001137779.1 BcsA 169..>403 CDD:224136 108/239 (45%)
pp-GalNAc-T 181..480 CDD:133004 141/305 (46%)
Ricin_B_lectin 496..626 CDD:279046 45/136 (33%)
RICIN 498..628 CDD:238092 45/136 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457019
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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