DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant9 and gly-9

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:NP_001022876.1 Gene:gly-9 / 176557 WormBaseID:WBGene00012934 Length:579 Species:Caenorhabditis elegans


Alignment Length:560 Identity:231/560 - (41%)
Similarity:322/560 - (57%) Gaps:38/560 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 VGKHKADLQAERMR----KKAAEQPKKKPQEDSKKVIDPPANF---EENPGELGKPVRLPKEMSD 161
            |..|:.|.:..:.:    :|.||:..:.|:..:.::...| |:   .|.|||.||||.|..:.::
 Worm    27 VAYHRNDRRRTKFQFPDIEKYAEELVRLPETWNGELHQIP-NYTAPREGPGEKGKPVVLTGKDAE 90

  Fly   162 ----EMKKAVDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARYLTNLPKTDVIICFHNEAW 222
                :|||     |..|.   :.||.||:.|.:||||...|||.......||||.|||.|.:|||
 Worm    91 LGQADMKK-----WFMNV---HASDKISLDRDVPDPRIQACKDIKYDYAALPKTSVIIIFTDEAW 147

  Fly   223 TVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAY-PKVQIIRGQKREGLIRARI 286
            |.||||||||::|||..|:.::||:||.|....|:..|:::...: .||::||...|.|||||::
 Worm   148 TPLLRTVHSVINRSPPELLQEVILLDDNSKRQELQEPLDEHIKRFGGKVRLIRKHVRHGLIRAKL 212

  Fly   287 LGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVG 351
            .||..|...::.:||||||...|||||::.||:...|.:|||:||.|||.||.||  ....::.|
 Worm   213 AGAREAVGDIIVFLDSHCEANHGWLEPIVQRISDERTAIVCPMIDSISDNTLAYH--GDWSLSTG 275

  Fly   352 GFDWNLQFSWHPVPERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLEL 416
            ||.|.|.|:|..:.|.|:||.....:.:.||||||||.:.:||:|..:|.||...|||||||||:
 Worm   276 GFSWALHFTWEGLSEEEQKRRTKPTDYIRSPTMAGGLLAANREYFFEVGGYDEEMDIWGGENLEI 340

  Fly   417 SFKTWMCGGTLEIVPCSHVGHIFRKRSPYKW---RSGVNVLKKNSVRLAEVWMDEYSQ-YYYHRI 477
            ||:.|||||::|.:||||||||||...||..   .:..:|...||.||||||||:|.: ||.||.
 Worm   341 SFRAWMCGGSIEFIPCSHVGHIFRAGHPYNMTGRNNNKDVHGTNSKRLAEVWMDDYKRLYYMHRE 405

  Fly   478 GNDKGDWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFI-PGDSVAHGEIRNLGYGGRTCLDAPAG 541
            .....|.||::.|.:||..|.||.|||:||||....|| ..|.||:|.:..:..|.|.|.|....
 Worm   406 DLRTKDVGDLTARHELRKRLNCKPFKWFLDNIAKGKFIMDEDVVAYGALHTVVSGTRMCTDTLQR 470

  Fly   542 KKHQKKAVGTYPCHRQGGN-QYWMLSKAGEIRRDDSCLDYAGKDVTLFGCHGGKGNQF---WTYR 602
            .:...:.:|.:.|..:|.: |...|||.|.:||:::|......::.:..|  .|..||   |.| 
 Worm   471 DEKMSQLLGVFHCQGKGSSPQLMSLSKEGNLRRENTCASEENGNIRMKTC--SKKAQFNERWAY- 532

  Fly   603 ENTKQLHHGTSGKCLAISESK--DKLLMEECSASLSRQQW 640
            || |.:.:..||||::.:..|  |..::.||......|:|
 Worm   533 EN-KMIRNLKSGKCMSTANLKPGDNAIVVECDEKDEHQKW 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 140/275 (51%)
pp-GalNAc-T 213..510 CDD:133004 151/301 (50%)
Ricin_B_lectin 521..640 CDD:279046 35/124 (28%)
RICIN 523..642 CDD:238092 35/124 (28%)
gly-9NP_001022876.1 pp-GalNAc-T 137..438 CDD:133004 151/302 (50%)
Ricin_B_lectin 450..571 CDD:279046 35/124 (28%)
RICIN 458..573 CDD:238092 34/118 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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