DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant9 and gly-6

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:NP_001022644.1 Gene:gly-6 / 175558 WormBaseID:WBGene00001631 Length:618 Species:Caenorhabditis elegans


Alignment Length:606 Identity:238/606 - (39%)
Similarity:332/606 - (54%) Gaps:95/606 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GQKQAHDEADIPP--------TVGKHKADLQAERMRKKAAEQPKKK---PQEDSKKVIDPPANFE 143
            |:.|...:..|.|        .||.:..:|..::.|...:|:....   |.:|.           
 Worm    45 GEDQISTQKAIKPIARSNYHVVVGHYNGNLPEDKKRNLTSEELNANLYAPHDDW----------- 98

  Fly   144 ENPGELGKPVRLPKEMSDEMKKAVDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARYLTNL 208
               ||.|..|   ..::.|.:|..|..:..|.||..|||.|||.|:||:.|...|:: ..|..||
 Worm    99 ---GEGGAGV---SHLTPEQQKLADSTFAVNQFNLLVSDGISVRRSLPEIRKPSCRN-MTYPDNL 156

  Fly   209 PKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAYP----- 268
            |.|.|||.:||||::.|||||.||:||||:.|:.:||||||:||...|:         ||     
 Worm   157 PTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFLR---------YPTLDTT 212

  Fly   269 ------KVQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVC 327
                  .::|||.::|.||||||::||..|:..|||:||||||||:|||||||.||..|...|.|
 Worm   213 LKPLPTDIKIIRSKERVGLIRARMMGAQEAQGDVLTFLDSHCECTKGWLEPLLTRIKLNRKAVPC 277

  Fly   328 PVIDVISDETLEYHYRDSGGVNV--GGFDWNLQFSWHPVPERERKRH--NSTAEPVYSPTMAGGL 388
            ||||:|:|.|.:|    ..|:.:  |||:|||||.|:.:|....|:|  :.|. |:.||||||||
 Worm   278 PVIDIINDNTFQY----QKGIEMFRGGFNWNLQFRWYGMPTAMAKQHLLDPTG-PIESPTMAGGL 337

  Fly   389 FSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSPYKW--RSGV 451
            |||:|.:|:.||.||.|.|||||||||:||:.|.|||.:||:|||||||:|||.||:.:  :|..
 Worm   338 FSINRNYFEELGEYDPGMDIWGGENLEMSFRIWQCGGRVEILPCSHVGHVFRKSSPHDFPGKSSG 402

  Fly   452 NVLKKNSVRLAEVWMDEYSQYYY------HRIGNDKGDWGDVSDRRKLRNDLKCKSFKWYLDNIY 510
            .||..|.:|:||||||::..|:|      ||:.:..    |||:|.:||..|.||||||||.|::
 Worm   403 KVLNTNLLRVAEVWMDDWKHYFYKIAPQAHRMRSSI----DVSERVELRKKLNCKSFKWYLQNVF 463

  Fly   511 PELFIPGDSVAHGEIRNLGYGGRTCLDAPAGKKHQKKAVGTYPC----HRQGGNQYWMLSKAGEI 571
            .:.|:|......|.:.: ......|| |...:....|...|..|    |:   .|.|:.:....|
 Worm   464 QDHFLPTPLDRFGRMTS-SSNSSVCL-AWTLRSSGIKTASTADCLKIFHK---TQLWLYTGDRRI 523

  Fly   572 RRDDS-CLD-----YAGKD--VTLFGCHGGKGNQFWTYRENTKQLHHGTSGKCLA----ISESKD 624
            |.|:. ||.     :...|  :.|..| .|...::|.::....:..:..:|.|||    ...:||
 Worm   524 RTDEHLCLSVVQLLHTTSDWKIQLKEC-AGFDTEYWDFKPKIGRFQNRKTGLCLASPDIFDPTKD 587

  Fly   625 KL---LMEECSASLSRQQWTL 642
            :.   ::::|.:|..||.||:
 Worm   588 EFNPPIVQKCRSSNDRQNWTI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 155/293 (53%)
pp-GalNAc-T 213..510 CDD:133004 167/319 (52%)
Ricin_B_lectin 521..640 CDD:279046 30/137 (22%)
RICIN 523..642 CDD:238092 31/137 (23%)
gly-6NP_001022644.1 WcaA 155..451 CDD:223539 161/313 (51%)
pp-GalNAc-T 160..463 CDD:133004 167/320 (52%)
Ricin_B_lectin 474..606 CDD:279046 30/137 (22%)
RICIN 476..608 CDD:238092 31/137 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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