DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant9 and galnt5

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:XP_017953060.2 Gene:galnt5 / 101733275 XenbaseID:XB-GENE-950717 Length:1073 Species:Xenopus tropicalis


Alignment Length:599 Identity:213/599 - (35%)
Similarity:322/599 - (53%) Gaps:98/599 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GGAGGLGDPIALALRNEPAG------EDFGINGNVIGGGGQKQAHDEADIPPTVGKHKADLQAER 115
            |...|:.|.:| .:.|...|      |:.|:...::..|...:.|:.|                 
 Frog   501 GSTEGILDKLA-RIDNAAKGNITELTEEEGVKDKLVPPGNVPKDHEPA----------------- 547

  Fly   116 MRKKAAEQPKKKPQEDSKKVIDPPANFEENPGELGKPVRLPKEMSDEMKKAVDDGWTKNAFNQYV 180
             :.::.:..|..|.:.:....||.|     ||:||:||.:|::...|.:..    |.:..||.|:
 Frog   548 -KPRSNKMHKVVPIDRTMSPRDPNA-----PGQLGRPVAVPEDKQGEAQSR----WREGHFNVYL 602

  Fly   181 SDLISVHRTLPDPRDAWCKDEARYLTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKII 245
            ||||.:.|.:.|.|...|.::..: .:||.|.:||||.:|.|:.|:|:|:|||:|||||||.:||
 Frog   603 SDLIPLDRAIQDTRPEGCSNQLIH-DDLPTTSIIICFIDEVWSTLMRSVYSVLNRSPEHLIKEII 666

  Fly   246 LVDDYSDMPHLKRQLEDYFAAYPKVQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCECTEGW 310
            ||||:|...:||.:|:.|....|||:::...:|.|||||||.|||.|...|||:||||.||..||
 Frog   667 LVDDFSTRDYLKEKLDTYVKKLPKVRVLHLPERHGLIRARIAGANIATGEVLTFLDSHVECNVGW 731

  Fly   311 LEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWNLQFSWHP-VPERERKRHNS 374
            |||||:::..|...|.||||:|||  .|:..|........|.|.|.|.|.|.. :||..::.:.:
 Frog   732 LEPLLEQVRINRRKVACPVIEVIS--ALDLSYMTVESFQRGVFTWPLNFGWKAMLPEVIQRDNIT 794

  Fly   375 TAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIF 439
            ..:|:..|.||||||||::.:|..|||||.|.|:|||||:|:|||.|||||.:||:|||.|||||
 Frog   795 EMDPIKCPVMAGGLFSIEKNYFYELGTYDPGLDVWGGENMEISFKIWMCGGEIEIIPCSRVGHIF 859

  Fly   440 RKRSPYKW-RSGVNVLKKNSVRLAEVWMDEYSQYYYHRIGNDK------GDWGDVSDRRKLRNDL 497
            |..:||.: :..:..:::|.||:||||:|:|.:.:|   |:.:      .:.||::::::||..|
 Frog   860 RNDNPYSFPKDRIKTVERNLVRVAEVWLDDYKEIFY---GHGQHLLKYLPNIGDLTEQKQLRERL 921

  Fly   498 KCKSFKWYLDNIYPELFIPGDSVAHGEIRNLGYGGRTCLDAPAGKKHQKKAVGTYPCHRQGGNQY 562
            :||:|.||:.|::|::                                    || |..|..|   
 Frog   922 QCKNFNWYIKNVFPDM------------------------------------GT-PLLRATG--- 946

  Fly   563 WMLSKAGEIRRDDSCLDYAGKDVTLFGCHGGKGNQFWTYRENTKQLHHGTSG-KCLAISESKDKL 626
             |||.. ::|:   ||........|..|.|.|.:|.::|    ..|.|...| :|:...|::|..
 Frog   947 -MLSNP-KLRK---CLAIENSTFVLESCEGNKKSQQFSY----TWLRHIRQGDQCIVPVENEDSA 1002

  Fly   627 LMEECSASLSRQQW 640
            .::.|..::..|:|
 Frog  1003 SLQPCDYTIVNQRW 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 138/272 (51%)
pp-GalNAc-T 213..510 CDD:133004 147/304 (48%)
Ricin_B_lectin 521..640 CDD:279046 25/119 (21%)
RICIN 523..642 CDD:238092 26/119 (22%)
galnt5XP_017953060.2 pp-GalNAc-T 633..934 CDD:133004 147/305 (48%)
Ricin_B_lectin 944..1065 CDD:395527 22/85 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 1 1.000 - - FOG0002384
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.