DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant9 and galnt12

DIOPT Version :9

Sequence 1:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster
Sequence 2:XP_002935181.2 Gene:galnt12 / 100485011 XenbaseID:XB-GENE-986239 Length:597 Species:Xenopus tropicalis


Alignment Length:584 Identity:251/584 - (42%)
Similarity:356/584 - (60%) Gaps:49/584 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 GNVIGGGGQKQAHDEADIPPTVGKHKAD-LQA-ERMRKKAAEQPKKKPQEDSKKVIDPPANFEEN 145
            |.::.|||:          |..||:..| ::| |.:..:..:.| .:..||.:::..|.  :|:.
 Frog    31 GFLLMGGGE----------PDSGKNLVDEVEAVEHLEPRDVDDP-GEDAEDYEQLRKPV--YEKP 82

  Fly   146 P------GELGKPVRLPKEMSDEMKKAVDDGWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARY 204
            |      ||.|:.|||  .:|.:.|:..::...|:..|.|:||.||:||.|.:..:..||.....
 Frog    83 PLDPNVLGEFGRAVRL--NLSGKEKELENESIHKHQINIYLSDKISLHRRLEERWNPMCKTVKYK 145

  Fly   205 LTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAYPK 269
            ...||||.|||.|:||||:.|||||||||:.||:.|:.:|||||||||..|||..||.|.:::.|
 Frog   146 YRRLPKTSVIIAFYNEAWSTLLRTVHSVLETSPDLLLEEIILVDDYSDREHLKEPLEKYISSWRK 210

  Fly   270 VQIIRGQKREGLIRARILGANHAKSPVLTYLDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVIS 334
            |::||..|||||:|||:|||:.||:.|||:||.||||.||||||||:||....:.|:|||||||.
 Frog   211 VRLIRANKREGLVRARLLGASIAKAEVLTFLDCHCECHEGWLEPLLERIREKESAVICPVIDVID 275

  Fly   335 DETLEYHYRDSGGVNVGGFDWNLQFSWHPVPERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRL 399
            ..|.|| ..::|...:|||||.:.|:||.|||.|:|:..|..:.:.||||||||||:.:::|:.|
 Frog   276 WNTFEY-LGNAGEPQIGGFDWRMVFTWHTVPETEQKKRRSPIDVISSPTMAGGLFSVSKKYFEHL 339

  Fly   400 GTYDSGFDIWGGENLELSFKTWMCGGTLEIVPCSHVGHIFRKRSPYKWRSGVNVLKKNSVRLAEV 464
            |:||:|.::|||||||.||:.|.|||:||:.|||||||:|.:::||.....::    ||||.|||
 Frog   340 GSYDTGMEVWGGENLEFSFRIWQCGGSLEVHPCSHVGHVFPRQAPYSRSKALS----NSVRAAEV 400

  Fly   465 WMDEYSQYYYHRIGN-DKGDWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFIPGDSVAH-GEIRN 527
            |:|||.:.||||..: .|..:||||:|.:|:..|:||.|||:||||||||.:|.|.... |.::|
 Frog   401 WLDEYKEIYYHRNPHARKEPYGDVSERLQLKERLQCKHFKWFLDNIYPELHVPEDKPGRFGMLKN 465

  Fly   528 LGYGGRTCLD--APAGKKHQKKAVGTYPCHRQGGNQYWMLSKAGEI----RRDDSC--LDYAGKD 584
            .|. ...|.|  .|.......:.:..||||..|.||::..:...||    |:.:.|  .|:....
 Frog   466 KGM-ENVCFDYNPPNENDVSGQQIILYPCHGMGQNQFFEYTSYNEIRYNTRQPEGCASADFDSDH 529

  Fly   585 VTLFGC-HGGK---GNQFWTYRENTKQLHHGTSGKCLA----ISESKDKLLMEECSASLSRQQW 640
            :|:|.| ..|:   .||.:.:|:: ..|.|..:.||:.    |.....:.::..||.| ..|:|
 Frog   530 LTMFLCRENGQEVPENQKFIFRDD-GILFHPKTKKCVQAVRNIKNEDPEPVLRPCSES-DNQKW 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 157/270 (58%)
pp-GalNAc-T 213..510 CDD:133004 169/297 (57%)
Ricin_B_lectin 521..640 CDD:279046 34/135 (25%)
RICIN 523..642 CDD:238092 35/134 (26%)
galnt12XP_002935181.2 pp-GalNAc-T 153..447 CDD:133004 169/298 (57%)
RICIN 461..593 CDD:238092 35/134 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2431
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153577at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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