DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and Gadl1

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001382689.1 Gene:Gadl1 / 73748 MGIID:1920998 Length:522 Species:Mus musculus


Alignment Length:508 Identity:130/508 - (25%)
Similarity:221/508 - (43%) Gaps:70/508 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRGMEMVEYICNYL--------ETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKI 64
            |.|.:.||..|..:        ..:|| :|.....|..||.||..|.....|..|::::..:|  
Mouse    44 KAGEKFVEEACRLIMEEVVLKATDVNE-KVCEWQPPEQLRQLLDLEMRDTGESQDKLLKLCQD-- 105

  Fly    65 MPGVTHW----QHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKA 125
               |.|:    .||||.....||..:.|:...::.:.:....:::..||....:|..||..:.:.
Mouse   106 ---VIHFSVKTNHPRFFNQLYAGLDYYSLAARIITEALNPSIYTYEVSPVFLLVEEAVLKKMIEC 167

  Fly   126 IGLPDHFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQH-PFVEEGHL--LSKLMAY 187
            :|       .|||.   |:.....|...:..|..||        .:| |.::|..|  |.:|:.:
Mouse   168 VG-------WKEGD---GIFNPGGSVSNMCAMNLAR--------YRHCPDIKEKGLSGLPRLILF 214

  Fly   188 CSKEAHSCVEKAAMICFV---KLRILEPDDDASLRGQTIYEAMEED----ELQGLVPFFVSTTLG 245
            .|.|.|..::|||....:   .:..:|.|.    ||:.|.|.:|:.    ..:|.|||.|..|.|
Mouse   215 TSAECHYSMKKAASFLGIGTQNVYFVETDG----RGKMIPEDLEKQIWQARQEGAVPFLVCATSG 275

  Fly   246 TTGSCAFDNLPEIGKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTN 310
            ||...|||.|.||.:..:|. |:||||||::.|::.:..:.:.||.||..|||...||:|.|:..
Mouse   276 TTVLGAFDPLDEIAEVCERH-GLWLHVDASWGGSALVSRKHRRLLHGIHRADSVAWNPHKMLMAG 339

  Fly   311 FDCSTLWVRDR---IRLTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGIS 372
            ..||.|.|:|:   ::...:.....|:.:..:.|.:.|.....:..|||..:.|.|...::.|.|
Mouse   340 IQCSALLVKDKSDLLKKCYSAKATYLFQQDKFYDVSYDTGDKSIQCSRRPDAFKFWMTWKALGTS 404

  Fly   373 GLQHYIRHHIKLAKRFEELVLKDKRFEICNQVKLGLVCF-----RLKGSDKLNE--KLLSIINES 430
            ||:..:.....|::...:.:.|.:.|::..:.:...|||     .|:..::..|  :.||::..:
Mouse   405 GLEERVNRAFALSRYLVDEIKKREGFKLLMEPEYTNVCFWYIPPSLREMEEGPEFWRKLSLVAPA 469

  Fly   431 GKLHMVPASV---------GDRYIIRFCAVAQNATAEDIDYAWDIIVDFANEL 474
            .|..|:....         |.....|...::...:.||:|:..|.|.....::
Mouse   470 IKEKMMKKGSLMLGYQPHRGKVNFFRQVVISPQVSREDMDFLLDEIDSLGRDM 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 109/400 (27%)
Gadl1NP_001382689.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835052
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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