DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and CSAD

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_024304779.1 Gene:CSAD / 51380 HGNCID:18966 Length:620 Species:Homo sapiens


Alignment Length:530 Identity:132/530 - (24%)
Similarity:205/530 - (38%) Gaps:109/530 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIMPGVTHWQ 72
            ::|..:.:.:|.:            .||..|:.||..|...:.|...||:......|...| ...
Human   130 QKGTSVSQKVCEW------------KEPEELKQLLDLELRSQGESQKQILERCRAVIRYSV-KTG 181

  Fly    73 HPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPDHFLALKE 137
            ||||.....:|....::.|.::.:.:....:::..:|....:|..||..|...:|          
Human   182 HPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVG---------- 236

  Fly   138 GSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHL--LSKLMAYCSKEA---HSCVE 197
            .|:|.|:.....|...:..:..||.|       ::|..::..|  |..|..:.|||.   |.  .
Human   237 WSSGDGIFCPGGSISNMYAVNLARYQ-------RYPDCKQRGLRTLPPLALFTSKEVGKRHR--P 292

  Fly   198 KAAMICFVKLRILEPD-------DDASL------------------RGQTI----------YEAM 227
            ...::..:...:..|.       |.|..                  ||:.:          :|..
Human   293 NPGLLILISSHVTTPSRRELRFWDLAPTVSEWSRLMREGKWSPRIWRGRLVWPRLRLTFHFFETF 357

  Fly   228 EEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKG 292
            ..|  .|.|||.||.|.|||...|||.|..|....||. |:|||||||:.|:..:....:.||.|
Human   358 ILD--SGAVPFLVSATSGTTVLGAFDPLEAIADVCQRH-GLWLHVDAAWGGSVLLSQTHRHLLDG 419

  Fly   293 IEYADSFNTNPNKWLLTNFDCSTLWVRDRIRLTSALV-------VDPLYLKHGYSDAAIDYRHWG 350
            |:.|||...||:|.|.....||.|.::|    ||.|:       ...|:.:..:.|.|:|.....
Human   420 IQRADSVAWNPHKLLAAGLQCSALLLQD----TSNLLKRCHGSQASYLFQQDKFYDVALDTGDKV 480

  Fly   351 VPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKRFEELVLKDKRFEICNQVKLGLVCF---- 411
            |...||...||||.:.::.|..||:..|.....||:...|.:.|.:.||:..:.:...|||    
Human   481 VQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVP 545

  Fly   412 -RLKG---SDKLNEKLLSI-------INESGKLHMVPASVGDRYIIRFCAVAQNA-TAEDIDYAW 464
             .|:|   |...:|:|..:       :.:.|.:.:.....|.|.......||.:| |..|:|:  
Human   546 PSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDF-- 608

  Fly   465 DIIVDFANEL 474
                 ..|||
Human   609 -----LLNEL 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 112/430 (26%)
CSADXP_024304779.1 DOPA_deC_like 185..616 CDD:99743 116/462 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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