DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and SecS

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster


Alignment Length:453 Identity:99/453 - (21%)
Similarity:166/453 - (36%) Gaps:146/453 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 GDGIGCIGFSWAASPACTE-------LETIVLDWLGKAIGLPDHFLALKEGSTGGGVIQTSASEC 152
            |.|||..|....|.|....       ...::|| |.:.||||                  |.:.|
  Fly    92 GHGIGRSGDLLEAQPKAAGSTLLARLTNALILD-LIRGIGLP------------------SCAGC 137

  Fly   153 VLVTM-----LAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSCVE--------KAAMICF 204
            .||.|     |....|:|::.:....:|    |.|::      :..||.:        ...:.|.
  Fly   138 FLVPMCTGMTLTLCLQSLRKRRPGARYV----LWSRI------DQKSCFKAITATGLVPVVIPCL 192

  Fly   205 VKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSC----AFDNLPEIGKQLQRF 265
            :|...|..:.|  |..:.| :::..|.:         ..|.||.||    ..|::.|:.|..:::
  Fly   193 IKGESLNTNVD--LFREKI-KSLGVDSI---------LCLYTTTSCFAPRNSDDIAEVSKLSKQW 245

  Fly   266 PGVWLHVDAAYAGNSFICPELKPLLKGIEYA------DSFNTNPNKWLLTNFDCSTLWVRDRIRL 324
            ....| |:.||.      .:.|.::..:|.|      |.|..:.:|.||             :.:
  Fly   246 QIPHL-VNNAYG------LQAKEIVNQLECANRVGRIDYFVQSSDKNLL-------------VPV 290

  Fly   325 TSALVVDPLYLKHGYSDAAIDY--RHWGVPLSRRFRSLKLWFVLRSYGISGLQ----------HY 377
            .||:|..  :.:....|.|..|  |..|      .:||.:...|.|.|.:|.:          :|
  Fly   291 GSAIVAS--FNESVLHDVASTYAGRASG------SQSLDVLMTLLSLGRNGFRLLFDQRGENFNY 347

  Fly   378 IRHHI-KLAKRFEELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVG 441
            :|.:: |.|:...|:|: |.||   |.:.|.:....|.|     :::.||......|||...| |
  Fly   348 LRENLRKFAEPRGEIVI-DSRF---NSISLAITLATLAG-----DQMKSITKLGSMLHMRGVS-G 402

  Fly   442 DRYIIRFCAVAQNATAEDIDYAWDIIVDFANEL---------------LEKEQHDELSEIMNR 489
            .|.|:    ..||.|.:..::     :||.:..               :.:|:.|:..:|.|:
  Fly   403 ARVIV----PGQNKTIDGHEF-----LDFGSHRSNLQVPYLTVAAGIGITREEIDKFFDIFNK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 79/361 (22%)
SecSNP_649556.3 AAT_I 12..457 CDD:302748 99/453 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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