DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and Hdc

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001260855.1 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster


Alignment Length:612 Identity:290/612 - (47%)
Similarity:387/612 - (63%) Gaps:50/612 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSTEFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIM 65
            ||..|:|:||.|||:||.:|||.:.||||.|.|.|||:|.|||..||.|.|.|.:|..|||..:|
  Fly     1 MDFKEYRQRGKEMVDYIADYLENIRERRVFPDVSPGYMRQLLPESAPIEGEPWPKIFSDVERIVM 65

  Fly    66 PGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPD 130
            ||:||||.|..||||||.||.||:|||||.|.|.|:||:||:||||||||.||::||||.|||||
  Fly    66 PGITHWQSPHMHAYFPALNSMPSLLGDMLADAINCLGFTWASSPACTELEIIVMNWLGKMIGLPD 130

  Fly   131 HFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSC 195
            .||.|...|.||||:||:|||..||.:||.|.:|::|...:||..::..:.::|:||||.:|||.
  Fly   131 AFLHLSSQSQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSS 195

  Fly   196 VEKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGK 260
            |||||:|..|::|.:|.|||.::||:.:.||:|:|..||||||:|..||||||||:||||.|||.
  Fly   196 VEKAALIGLVRMRYIEADDDLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEIGI 260

  Fly   261 QLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRIRLT 325
            ..... .:||||||||||::|||||.:..|:|||.|||...||:|||:.:||.:.|||||...:.
  Fly   261 VCAEH-HLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALWVRDSTAVH 324

  Fly   326 SALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKRFEE 390
            ....|:||||:|..|..|:|:.||.:|||||||:||:|||||||||.|||.:||..::||::||.
  Fly   325 RTFNVEPLYLQHENSGVAVDFMHWQIPLSRRFRALKVWFVLRSYGIKGLQRHIREGVRLAQKFEA 389

  Fly   391 LVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCAVAQNA 455
            |||.|.|||:..:..||||.||::|.:::.||||..:|..|.||.:|:|:..:|:|||...:.:.
  Fly   390 LVLADHRFELPAKRHLGLVVFRIRGDNEITEKLLKRLNHRGNLHCIPSSLKGQYVIRFTITSTHT 454

  Fly   456 TAEDIDYAWDIIVDFANELLEKEQHDELS-EIMNRKKQDTLAQKRSFFVRMVSDPKIYNPAINKA 519
            |.:||...|..|...|:.:||     |:: .|.||.......:|...|                 
  Fly   455 TLDDIVKDWMEIRQVASTVLE-----EMNITISNRVYLKETKEKNEAF----------------- 497

  Fly   520 GTPKLSMELP-SPVVSRGSAPIIRTQSSVDHNSWISWPLAFLFNSNNEEKGSNVSLRFRHLDTNV 583
            |:..|....| ||.|..||                   .|.:|:::.....:...:|..|.::  
  Fly   498 GSSLLLSNSPLSPKVVNGS-------------------FAAIFDADEFLAKTYAGVRIAHQES-- 541

  Fly   584 RPSSSRRNSG---AGSSPSPENELDYV 607
             ||..||..|   :|...|.::.:|.|
  Fly   542 -PSMRRRVRGILMSGKQFSLDSHMDVV 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 220/378 (58%)
HdcNP_001260855.1 Pyridoxal_deC 35..413 CDD:278699 220/378 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445353
Domainoid 1 1.000 368 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 417 1.000 Inparanoid score I444
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - mtm1068
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - P PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
1110.800

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