DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and Tdc1

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster


Alignment Length:609 Identity:300/609 - (49%)
Similarity:383/609 - (62%) Gaps:53/609 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSTEFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIM 65
            ||..||||.|.|:::|||.|...:.||.|.|:::||||:.|||.:|||.||.:..::.|.|.|||
  Fly     1 MDVEEFRKYGKEVIDYICQYGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65

  Fly    66 PGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPD 130
            |||.||.||:|.||||:||||||:|||||...||.||||||:.||..||||||::|..||:|||.
  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130

  Fly   131 HFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSC 195
            .|::...||||||.:|.||||||||:::.|||:|:..||.| ..|.:...|..|:||.|:||||.
  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQ-TSVHDSVFLPSLIAYASREAHSS 194

  Fly   196 VEKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGK 260
            ||||..:..|||||::.|:...:|...:.:|::.|...||.||||..|:||||.||||::.||||
  Fly   195 VEKATKMALVKLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDDITEIGK 259

  Fly   261 QLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRIRLT 325
            ..::...:|||||.||||||||.||::....|:||||||||||||.||||||.|.|||||.:.|.
  Fly   260 VCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVRDVMNLK 324

  Fly   326 SALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKRFEE 390
            |||.|:||||:|.:. ..:||||:|:|||||||:||||||.|:|||.|||.|||:|:.|||:||.
  Fly   325 SALNVNPLYLRHEHL-TGVDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHMALAKKFEM 388

  Fly   391 LVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCAVAQNA 455
            ||.||:|||:.|.|.|||||||::..|:.|..||:.||.|||:||.||....||:||||...::|
  Fly   389 LVRKDERFEVRNDVHLGLVCFRMRTGDEPNHMLLAQINHSGKMHMTPAKFNGRYVIRFCVTYEHA 453

  Fly   456 TAEDIDYAWDIIVDFANELLEKEQHDELS-----EIMNRKKQDTLAQKRSFFVRMVSDPKIYNPA 515
            |.:||..||..|..||.|:|...|.:..|     |...|...:.||            |....|.
  Fly   454 TEKDILEAWTQIKCFAEEILRDHQLESSSVPTTPEGSERTSSEPLA------------PVAGKPP 506

  Fly   516 INKAGTPKLSMELP-SPVVSR------------GSAPII---------RTQSSVDHNSWISWPLA 558
            |.|..|...|:... :..:||            |..||:         ..|.:.|.|.       
  Fly   507 IKKRLTRTKSLRFSFTRSISREQYQSQSEHLMDGCTPILVVDPKTLQENFQKAADDND------- 564

  Fly   559 FLFNSNNEEKGSNVSLRFRHLDTN 582
             ..|||...|..::|    .:||:
  Fly   565 -RNNSNGNVKLKDIS----DVDTD 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 227/378 (60%)
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 227/378 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 368 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 417 1.000 Inparanoid score I444
Isobase 1 0.950 - 0.815392 Normalized mean entropy S2516
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - mtm1068
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - P PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
1110.820

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