DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and b

DIOPT Version :10

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_476788.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster


Alignment Length:475 Identity:119/475 - (25%)
Similarity:200/475 - (42%) Gaps:60/475 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIMPGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGI 98
            ||..||.|...:..::.|..|::...:.:.|...| ...||.|.....:|....:::|..|.|.:
  Fly   127 EPAELRQLFDFQLREQGESQDKLRELLRETIRFSV-KTGHPYFINQLYSGVDPYALVGQWLTDAL 190

  Fly    99 GCIGFSWAASPACTELETIVLDWLGKAIGLPDHFLALKEGSTGGGVIQTSASECVLVTMLAARAQ 163
            ....:::..:|..|.:|..||..:.:.:|.|:       |..|.|:.....|        .|...
  Fly   191 NPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPN-------GGQGDGIFCPGGS--------IANGY 240

  Fly   164 ALKRLKAQH-PFVEEGHLLS--KLMAYCSKEAHSCVEKAAMICFV-----KLRILEPDDDASLRG 220
            |:...:.:| |..::..|.:  .|:.:.|::||..|||.||  |:     .:|.:..::...:|.
  Fly   241 AISCARYRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAM--FMGFGSDHVRKIATNEVGKMRL 303

  Fly   221 QTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGKQLQRFPGVWLHVDAAYAGNSFICPE 285
            ..:.:.::.....|..|..||.|.|||...|||:|..|.:..::: .:|:|||||:.|.:.:..:
  Fly   304 SDLEKQVKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKY-NMWMHVDAAWGGGALMSKK 367

  Fly   286 LKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRIRLTSALVVDPLYL--KHGYSDAAIDYRH 348
            .:.||.|||.|||...||:|.|..:..|||...|.:..|......:..||  |..:.|.:.|...
  Fly   368 YRHLLNGIERADSVTWNPHKLLAASQQCSTFLTRHQQVLAQCHSTNATYLFQKDKFYDTSFDTGD 432

  Fly   349 WGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKRFEELVLKDKRFEI------CNQVKLG 407
            ..:...||....|.||:.::.|..||:.::....::|:.|...|.:...||:      |..:...
  Fly   433 KHIQCGRRADVFKFWFMWKAKGTQGLEAHVEKVFRMAEFFTAKVRERPGFELVLESPECTNISFW 497

  Fly   408 LVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIR----------------FCAVAQNAT 456
            .|...|:..::..|..       .:||.|...|.:..|.:                |..|.||:.
  Fly   498 YVPPGLREMERNREFY-------DRLHKVAPKVKEGMIKKGSMMITYQPLRQLPNFFRLVLQNSC 555

  Fly   457 AEDID--YAWDIIVDFANEL 474
            .|:.|  |..|.|...|..|
  Fly   556 LEESDMVYFLDEIESLAQNL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:395219 100/394 (25%)
bNP_476788.1 GadA 127..573 CDD:439846 117/471 (25%)

Return to query results.
Submit another query.