DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and Ddc

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001257781.1 Gene:Ddc / 24311 RGDID:2494 Length:480 Species:Rattus norvegicus


Alignment Length:481 Identity:266/481 - (55%)
Similarity:351/481 - (72%) Gaps:4/481 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSTEFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIM 65
            |||.|||:||.|||:||.:||:.:..|.|.|.|||||||.|:|..||||||.::.|:||:|..||
  Rat     1 MDSREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRALIPTTAPQEPETYEDIIRDIEKIIM 65

  Fly    66 PGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPD 130
            ||||||..|.|.||||..:|:|::|.|||...|||||||||||||||||||:::|||||.:.||:
  Rat    66 PGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPE 130

  Fly   131 HFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSC 195
            .|||.:.|. ||||||.||||..||.:||||.:.:::|:|..|.:.:..|:.||:||.|.:|||.
  Rat   131 AFLAGRAGE-GGGVIQGSASEATLVALLAARTKMIRQLQAASPELTQAALMEKLVAYTSDQAHSS 194

  Fly   196 VEKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGK 260
            ||:|.:|..||::.:..|.:.|:|...:.||:|.|:..||:||||..|||||..|:||||.|:|.
  Rat   195 VERAGLIGGVKIKAIPSDGNYSMRAAALREALERDKAAGLIPFFVVVTLGTTSCCSFDNLLEVGP 259

  Fly   261 QLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRIRLT 325
            ...: .|||||:||||||::|||||.:.||.|:|:|||||.||:||||.|||||.:||:.|..||
  Rat   260 ICNQ-EGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDLT 323

  Fly   326 SALVVDPLYLKHGYSDAAI--DYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKRF 388
            .|..:||:||:|.:.|:.:  |||||.:||.|||||||:|||.|.||:.|||.|||.|:||:..|
  Rat   324 EAFNMDPVYLRHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVKLSHEF 388

  Fly   389 EELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCAVAQ 453
            |.||.:|.|||||.:|.|||||||||||::|||.||..||.:.|:|:||..:.|::::||...::
  Rat   389 ESLVRQDPRFEICTEVILGLVCFRLKGSNQLNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCSR 453

  Fly   454 NATAEDIDYAWDIIVDFANELLEKEQ 479
            ...:..:..||:.|.|.|:.:|..|:
  Rat   454 TVESAHVQLAWEHIRDLASSVLRAEK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 221/380 (58%)
DdcNP_001257781.1 Pyridoxal_deC 35..414 CDD:278699 221/380 (58%)
2 X approximate tandem repeats 58..178 72/120 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X696
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

Return to query results.
Submit another query.