DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and Sepsecs

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_766078.1 Gene:Sepsecs / 211006 MGIID:1098791 Length:504 Species:Mus musculus


Alignment Length:549 Identity:111/549 - (20%)
Similarity:179/549 - (32%) Gaps:188/549 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ERRVTPSVEPGYLR----------HL--LPPEAPQEPED-WDQIMRDV----------------- 60
            ||||:|:    |:|          ||  |..|..:.||| ||:...::                 
Mouse    10 ERRVSPA----YVRQGCEARRAHEHLIRLLLEQGKCPEDGWDESTLELFLHELAVMDSNNFLGNC 70

  Fly    61 -----EDKIMPGVTHWQHPRF-HAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVL 119
                 |.::...:...:|.|| |                   |||..|...|..|          
Mouse    71 GVGEREGRVASALVARRHYRFIH-------------------GIGRSGDISAVQP---------- 106

  Fly   120 DWLGKAIGLPDHFLALKEGSTGGGVIQT-------SASECVLVTMLAARAQALKRLKAQHPFVEE 177
                ||.|     .:|....|...|:..       |.:.|.:|.|....:..|..|..:|...: 
Mouse   107 ----KAAG-----SSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPK- 161

  Fly   178 GHLLSKLMAYCSKEAHSCVEKAAMICF---VKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFF 239
                :|.:.:...:..||.:......|   |...:||.|:   ||  |..:|:|. ::|.|.|..
Mouse   162 ----AKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDE---LR--TDLKAVEA-KIQELGPEH 216

  Fly   240 VSTTLGTTGSCAFDNLPEIGKQLQRFPGVWLHVDA------AYAGNSFICPELKPLLKGIEYADS 298
            :.....||...|    |.:..:|:....:..:.|.      ||...|..|..|......:...|:
Mouse   217 ILCLHSTTACFA----PRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDA 277

  Fly   299 FNTNPNKWLLTNFDCSTLWVRDRIRLTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRF------ 357
            |..:.:|    ||         .:.:..|::.       |:::..|.      .:|:.:      
Mouse   278 FVQSLDK----NF---------MVPVGGAIIA-------GFNEPFIQ------DISKMYPGRASA 316

  Fly   358 -RSLKLWFVLRSYGISGLQHYIRHH-----------IKLAKRFEELVLKDKRFEICNQVKLGLVC 410
             .||.:...|.|.|.||.:..::..           .|||:...|.:|:...    |.:.|.:..
Mouse   317 SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPH----NPISLAMTL 377

  Fly   411 FRLKG-SDKLNEKLLSII--NESGKLHMVP---------------ASVGDRYIIRFCAVAQNATA 457
            ..:.| .||...:|.|::  .:......||               .|..|.|.   ||....|.|
Mouse   378 KTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYP---CAYLNAAAA 439

  Fly   458 -----EDIDYAWDII--VDFANELLEKEQ 479
                 :|:|.   .|  :|....::.|||
Mouse   440 IGMKMQDVDL---FIKRLDKCLNIVRKEQ 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 85/448 (19%)
SepsecsNP_766078.1 Tetramerization. /evidence=ECO:0000269|PubMed:18093968 1..44 12/37 (32%)
selenium_SpcS 13..458 CDD:211833 105/537 (20%)
Phosphate loop (P-loop). /evidence=ECO:0000269|PubMed:18093968 96..106 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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