DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and hdl-2

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_501539.3 Gene:hdl-2 / 182464 WormBaseID:WBGene00006409 Length:611 Species:Caenorhabditis elegans


Alignment Length:547 Identity:117/547 - (21%)
Similarity:230/547 - (42%) Gaps:122/547 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLR-HLLPPEAPQEPEDWDQIMRDVEDKIMPGV 68
            ||.|....:|::|.:|.:..:::.|.|..:....| |:   :.|::.|:..:|::|:::.::|.:
 Worm   118 EFIKCMSLVVQFINDYFDESHKQPVIPENDVNSSRIHV---KVPEKAEELTEILKDLKEIVIPNI 179

  Fly    69 THWQHPRFHAYFPAGNSFPSILGDMLGDGI-GCIGFSWAASPACTELETIVLDWLGKAIGLPDHF 132
            .|..|||:||.| ||.|    |.|::...| ..:|....:||....:|.|:..||..::.:|...
 Worm   180 CHTHHPRYHAKF-AGKS----LADLVASTISAALGHDVNSSPIIESIERIICKWLSTSMAIPQIK 239

  Fly   133 LALKE-GSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSK---LMAYCSKEAH 193
            .:|.| ....|.|..|...  |.::::....:..::       .:.|...||   .:.|||.::.
 Worm   240 SSLGELRDPIGTVFYTPCD--VFISVIRHAIEKFEK-------TDSGKERSKNADYIVYCSDDSQ 295

  Fly   194 SCVEKAAMICFVKLR--ILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLP 256
            ..:::..:.|.||||  |.:..:.:.:....:.:.||:|..:|..|..:....|:....|.|.:.
 Worm   296 VPLKEPCISCRVKLRKVITDEKNGSGMTSANLLKQMEKDIARGFTPLVIIANYGSANIAANDEIW 360

  Fly   257 EIGKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLT-----NFDCSTL 316
            :: ..:.|...:|||:||:|||    |          |:.||.:.|....|::     :..||:|
 Worm   361 DL-VTVSRSKKIWLHLDASYAG----C----------EWLDSNSRNNVHALISEVHSVHITCSSL 410

  Fly   317 ----------WVRDRIRLTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGI 371
                      |..:::.|..|.:   ||.:|                     .::||.::|.:||
 Worm   411 FPYSGRISVVWSCEKLELDGAKI---LYGEH---------------------PIRLWILIRLHGI 451

  Fly   372 SGLQHYIRHHIKLAKRFEELVLKDKR-FEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHM 435
            ..::..::..|.|...|.|.:....: ||:.:..:.|:..|:.|     |:|:.....::.|:  
 Worm   452 RSIREAVKRKIILGNAFSERMSHHSQLFEMHHTNEHGVTVFQYK-----NKKIKDRTEDTNKI-- 509

  Fly   436 VPASVGDRYIIRFCAVAQNATAEDIDYAWDIIVDFANELLEK---------------------EQ 479
              .|:...|::         .:..:.::   ||.|..::|.|                     ..
 Worm   510 --TSMFHNYLV---------LSSTLKFS---IVSFHGKVLIKSVVNYGRCNLSIMDESVSTLVNS 560

  Fly   480 HDELSEIMNRKKQDTLAQKRSFFVRMV 506
            .||..|.:.:||:......::.|..|:
 Worm   561 VDEFEEALKKKKKIVCETPKNEFCEMI 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 91/402 (23%)
hdl-2NP_501539.3 AAT_I 125..527 CDD:302748 102/478 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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