DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and hdl-1

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_502265.2 Gene:hdl-1 / 178129 WormBaseID:WBGene00001839 Length:905 Species:Caenorhabditis elegans


Alignment Length:586 Identity:220/586 - (37%)
Similarity:341/586 - (58%) Gaps:60/586 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSTEFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIM 65
            |...:||....::|:|:....|::...|.:|:::||||:.||||:|||:.||.|.|:.|....|:
 Worm   343 MSRDQFRNAAKKVVDYLMKQDESIRAARCSPALKPGYLKALLPPKAPQKAEDIDDILEDYHKLIV 407

  Fly    66 PGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPD 130
            ||::|..||.||:::||||||..:|.|:||..||..||.|.::||.||||.:::||||:.:.||.
 Worm   408 PGLSHSSHPNFHSFYPAGNSFHCLLADLLGGHIGDAGFYWTSNPALTELEVLMMDWLGEMMALPK 472

  Fly   131 HFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSC 195
            .||...|.|.|||.:|.|.:|...:.::|||...::|:|.:...:....:|::|:||.|.:|...
 Worm   473 EFLLFPEASRGGGCMQRSDTESNFLVLVAARTDMIRRMKQRDKRLRSSDILARLVAYTSSDARRS 537

  Fly   196 V--EKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEI 258
            :  :.||.:..||:|:|..|.:..|||.|::.|:..|..:||:||||....||:|.|:||:|.|:
 Worm   538 IKMKMAAEVAMVKMRVLPTDQNFILRGDTLHAAIMADIERGLIPFFVGANFGTSGPCSFDHLHEL 602

  Fly   259 GKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRIR 323
            | .:.|..|.||||||||||.:.||||::.|::||::||||.|.|:|.::...|...||||||.:
 Worm   603 G-PVCREHGTWLHVDAAYAGTALICPEIRGLMRGIDWADSFCTTPSKLIIAVCDVCCLWVRDRHK 666

  Fly   324 LTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKRF 388
                       |:|...:...|....|:|.|:|..:||:||::||:|:..||:.||.||:|.:..
 Worm   667 -----------LQHASLENHPDLPFKGLPTSQRVGALKIWFMIRSFGVENLQNQIREHIRLGQVM 720

  Fly   389 EELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCAVAQ 453
            .:::.||.|||:||:|.:||:|||.|.:|..|:.||...||:|.:.:....:.::::||.|..:.
 Worm   721 TKILQKDLRFEVCNKVVMGLICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSP 785

  Fly   454 NATAEDIDYAWDIIVDFANE--LLEKEQHDELSEIMNRKKQDTLAQKRSFFVRMVSDP-KIYN-- 513
            ..:.||:|.|:.:|   .||  :|:..|:  ..|:||:.:.:|       |:|   || ||::  
 Worm   786 KCSEEDLDSAYKLI---CNEYDILKPFQY--RIEVMNQAELET-------FIR---DPAKIHSSA 835

  Fly   514 ------PAINK-------------------AGTPKLSMELPSPVVSRGSAPIIRTQSSVDHNSWI 553
                  |.:|.                   |..|..|.:.|. |.::|..|.....||...||.|
 Worm   836 EVSRRFPVVNPLEPCRSLAQISSQMHTAEYADPPGKSNKSPQ-VAAKGELPSAAPPSSRTPNSDI 899

  Fly   554 S 554
            |
 Worm   900 S 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 167/380 (44%)
hdl-1NP_502265.2 Pyridoxal_deC 377..746 CDD:278699 167/380 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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