DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and tdc-1

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_495743.1 Gene:tdc-1 / 174327 WormBaseID:WBGene00006562 Length:705 Species:Caenorhabditis elegans


Alignment Length:583 Identity:336/583 - (57%)
Similarity:412/583 - (70%) Gaps:59/583 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSTEFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIM 65
            |...|||:.|.|.|:||.:|||.:.:|||.|::|||||:.|:|.|||..||.::.:|.|.|..||
 Worm    77 MTRDEFRQYGKETVDYIVDYLENIQKRRVVPAIEPGYLKDLIPSEAPNTPESFESVMEDFEKLIM 141

  Fly    66 PGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPD 130
            ||:|||||||||||||||||||||:.|||.|.|||:||||||.||.||||.|:|||.||.||||.
 Worm   142 PGITHWQHPRFHAYFPAGNSFPSIIADMLSDAIGCVGFSWAACPAMTELELIMLDWFGKMIGLPA 206

  Fly   131 HFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSC 195
            .||.|.|...||||||:|||||..||:||||.:.:|.|:.:.||||||.|||||:|||||||||.
 Worm   207 EFLPLTENGKGGGVIQSSASECNFVTLLAARFEVMKELRQRFPFVEEGLLLSKLIAYCSKEAHSS 271

  Fly   196 VEKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIG- 259
            ||||.||..|||||||.|....|||.|:..|::||...||:|||||||||||..|:||.|.||| 
 Worm   272 VEKACMIGMVKLRILETDSKFRLRGDTLRNAIQEDRNLGLIPFFVSTTLGTTSCCSFDVLSEIGP 336

  Fly   260 --KQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRI 322
              |:.:    :||||||||:|::|||||.:||:.|||||.|||||||||||.||||||:|||||.
 Worm   337 ICKENE----LWLHVDAAYSGSAFICPEFRPLMNGIEYAMSFNTNPNKWLLINFDCSTMWVRDRF 397

  Fly   323 RLTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKR 387
            :||.|||||||||:|.:.|.:|||||||:||||||||||||||:|.|||.|||.|||.|::|||:
 Worm   398 KLTQALVVDPLYLQHSWMDKSIDYRHWGIPLSRRFRSLKLWFVIRMYGIDGLQKYIREHVRLAKK 462

  Fly   388 FEELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCAVA 452
            .|.|:..|.:|||.|:|.:||||||:||.|:||:.||:.:|.||::||||||:|||::||||..|
 Worm   463 METLLRADAKFEIVNEVIMGLVCFRMKGDDELNQTLLTRLNASGRIHMVPASLGDRFVIRFCVCA 527

  Fly   453 QNATAEDIDYAWDIIVDFANELLE-------KEQHDEL--------------------------- 483
            :|||.:||:.|::||......:|.       .|:.:|.                           
 Worm   528 ENATDKDIEVAYEIIAQATQHVLHDSVKAVIAEEDEEAVALEEMVADLNITETPEKCLTRQNSAN 592

  Fly   484 --------------SEIMNRKKQDTLAQKRSFFVRMVSDPKIYNPAI----NKAGTPKLSMEL 528
                          .||:.:|:.::||:||||.||||||||.|||.|    |.|...|:|.:|
 Worm   593 AAESGQKLERQLSKEEILAQKQHESLAKKRSFLVRMVSDPKCYNPKIVRHLNMANHRKMSQDL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 258/381 (68%)
tdc-1NP_495743.1 Pyridoxal_deC 111..489 CDD:278699 258/381 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158343
Domainoid 1 1.000 544 1.000 Domainoid score I128
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76115
Inparanoid 1 1.050 667 1.000 Inparanoid score I387
Isobase 1 0.950 - 0.815392 Normalized mean entropy S2516
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - oto19882
orthoMCL 1 0.900 - - OOG6_100572
Panther 1 1.100 - - LDO PTHR11999
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3838
SonicParanoid 1 1.000 - - X696
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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