DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and DDC

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_000781.2 Gene:DDC / 1644 HGNCID:2719 Length:480 Species:Homo sapiens


Alignment Length:481 Identity:260/481 - (54%)
Similarity:347/481 - (72%) Gaps:4/481 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSTEFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIM 65
            |:::|||:||.|||:|:.||:|.:..|:|.|.|||||||.|:|..|||||:.::.|:.|||..||
Human     1 MNASEFRRRGKEMVDYMANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDVEKIIM 65

  Fly    66 PGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPD 130
            ||||||..|.|.||||..:|:|::|.|||...|||||||||||||||||||:::|||||.:.||.
Human    66 PGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPK 130

  Fly   131 HFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSC 195
            .||..|.|. ||||||.||||..||.:||||.:.:.||:|..|.:.:..::.||:||.|.:|||.
Human   131 AFLNEKAGE-GGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSS 194

  Fly   196 VEKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGK 260
            ||:|.:|..|||:.:..|.:.::|...:.||:|.|:..||:|||:..|||||..|:||||.|:|.
Human   195 VERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGP 259

  Fly   261 QLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRIRLT 325
            ...: ..:||||||||||::|||||.:.||.|:|:|||||.||:||||.|||||.:||:.|..||
Human   260 ICNK-EDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDLT 323

  Fly   326 SALVVDPLYLKHGYSDAAI--DYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKRF 388
            .|..:||.||||.:.|:.:  |||||.:||.|||||||:|||.|.||:.|||.|||.|::|:..|
Human   324 GAFRLDPTYLKHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEF 388

  Fly   389 EELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCAVAQ 453
            |.||.:|.|||||.:|.|||||||||||:|:||.||..||.:.|:|:||..:.|::::||...::
Human   389 ESLVRQDPRFEICVEVILGLVCFRLKGSNKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSR 453

  Fly   454 NATAEDIDYAWDIIVDFANELLEKEQ 479
            ...:..:..||:.|.:.|.::|..|:
Human   454 TVESAHVQRAWEHIKELAADVLRAER 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 218/380 (57%)
DDCNP_000781.2 Pyridoxal_deC 35..414 CDD:365998 218/380 (57%)
2 X approximate tandem repeats 58..178 73/120 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.815392 Normalized mean entropy S2516
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3838
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.710

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