DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and Hdc

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_006498847.1 Gene:Hdc / 15186 MGIID:96062 Length:681 Species:Mus musculus


Alignment Length:656 Identity:278/656 - (42%)
Similarity:383/656 - (58%) Gaps:89/656 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSTEFRKR-----GMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDV 60
            :.:|..|.|     |.|||:||..||.|:.||:|||:|:|||||..||..||:||:.||.|..|:
Mouse    23 LSTTTLRVRCFILSGKEMVDYISQYLSTVRERQVTPNVQPGYLRAQLPASAPEEPDSWDSIFGDI 87

  Fly    61 EDKIMPGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKA 125
            |..|||||.|||.|..|||:||..|:||:|||||.|.|.|:||:||:||||||||..::|||.|.
Mouse    88 ERVIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNIMDWLAKM 152

  Fly   126 IGLPDHFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSK 190
            :|||::||.....|.||||:|::.||..|:.:||||...:..:||..|...|..|.::|:||.|.
Mouse   153 LGLPEYFLHHHPSSRGGGVLQSTVSESTLIALLAARKNKILAMKACEPDANESSLNARLVAYTSD 217

  Fly   191 EAHSCVEKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNL 255
            :|||.||||.:|..||:|.|..||:.||||:.:.:|:|||:.|||||.||..||||||.||||.|
Mouse   218 QAHSSVEKAGLISLVKIRFLPVDDNFSLRGEALQKAIEEDKQQGLVPVFVCATLGTTGVCAFDRL 282

  Fly   256 PEIGKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRD 320
            .|:| .:....|:||||||||||.:|:||||:..|:||||||||..||:||::.:|||:..||:|
Mouse   283 SELG-PICASEGLWLHVDAAYAGTAFLCPELRGFLEGIEYADSFTFNPSKWMMVHFDCTGFWVKD 346

  Fly   321 RIRLTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLA 385
            :.:|.....|:|:||:|..|.||.|:.||.:||||||||:|||||:||:|:..||.::||..::|
Mouse   347 KYKLQQTFSVNPIYLRHANSGAATDFMHWQIPLSRRFRSIKLWFVIRSFGVKNLQAHVRHGTEMA 411

  Fly   386 KRFEELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCA 450
            |.||.||..|..|||..:..||||.|||||.:.|.|.:|..|.::|:|.::||::.|:.||||..
Mouse   412 KYFESLVRSDPSFEIPAKRHLGLVVFRLKGPNCLTESVLKEIAKAGQLFLIPATIQDKLIIRFTV 476

  Fly   451 VAQNATAEDIDYAWDIIVDFANELLEKEQHDELSEIMNRKKQDTLAQKRSFFVRMVSDPKIYNPA 515
            .:|..|.|||...|.:|.:.||.:|  .||                        ..|.|      
Mouse   477 TSQFTTKEDILRDWHLIQEAANLVL--SQH------------------------CTSQP------ 509

  Fly   516 INKAGTPKLSMELPSPVVSRGSAPIIRTQSSVDHNSWISWPLAFLFNSNNEEKGSNVSLRFRHLD 580
                 :|:....:|.|..:||                        .:..:..:|.:...:.|.:.
Mouse   510 -----SPRAKNVIPPPPGTRG------------------------LSLESVSEGGDDPAQARKII 545

  Fly   581 TNVRPSSSRRNSGAG--SSPSPENE------------------LDYVNVQQQQMEQR--SPRRSP 623
            .....|.:||..|:.  :.|.|.::                  ..|::||.::...|  |....|
Mouse   546 KQPGASLARREGGSDLETMPDPFDDCFSEEAPNTTKHKLSSFLFSYLSVQNRRKTTRSLSCNSVP 610

  Fly   624 MAVRKA 629
            |:.:|:
Mouse   611 MSAQKS 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 209/378 (55%)
HdcXP_006498847.1 Pyridoxal_deC 62..440 CDD:365998 209/378 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100572
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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