DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdc2 and Gad2

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_032104.2 Gene:Gad2 / 14417 MGIID:95634 Length:585 Species:Mus musculus


Alignment Length:506 Identity:120/506 - (23%)
Similarity:212/506 - (41%) Gaps:82/506 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MVEYICNYLETLNERRVTPSVEPGYLRHLLPP---EAPQEPEDWDQIMRDVEDKIMPGVTHWQ-- 72
            :::|:....:     |.|..::..|...||..   |...:|::.::|:           ||.|  
Mouse   118 LLQYVVKSFD-----RSTKVIDFHYPNELLQEYNWELADQPQNLEEIL-----------THCQTT 166

  Fly    73 --------HPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLP 129
                    |||:......|.....:..|.|........|::..:|....||.:.|..:.:.||.|
Mouse   167 LKYAIKTGHPRYFNQLSTGLDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWP 231

  Fly   130 DHFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEG-HLLSKLMAYCSKEAH 193
                    |.:|.|:.....:...:..||.||.:....:|      |:| ..:.:|:|:.|:.:|
Mouse   232 --------GGSGDGIFSPGGAISNMYAMLIARYKMFPEVK------EKGMAAVPRLIAFTSEHSH 282

  Fly   194 SCVEKAAMICFV---KLRILEPDDDASLRGQTIYEAME----EDELQGLVPFFVSTTLGTTGSCA 251
            ..::|.|....:   .:.:::.|:    ||:.|...:|    |.:.:|.|||.||.|.|||...|
Mouse   283 FSLKKGAAALGIGTDSVILIKCDE----RGKMIPSDLERRILEVKQKGFVPFLVSATAGTTVYGA 343

  Fly   252 FDNLPEIGKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTL 316
            ||.|..:....:::. :|:|||||:.|...:..:.|..|.|:|.|:|...||:|.:.....||.|
Mouse   344 FDPLLAVADICKKYK-IWMHVDAAWGGGLLMSRKHKWKLSGVERANSVTWNPHKMMGVPLQCSAL 407

  Fly   317 WVRDRIRLTSALVVDPLYL----KHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHY 377
            .||:...:.|...:...||    ||  .|.:.|.....:...|.....|||.:.|:.|.:|.:.:
Mouse   408 LVREEGLMQSCNQMHASYLFQQDKH--YDLSYDTGDKALQCGRHVDVFKLWLMWRAKGTTGFEAH 470

  Fly   378 IRHHIKLAKRFEELVLKDKRFEIC--NQVKLGLVCF---------------RLKGSDKLNEKLLS 425
            |...::||:....::...:.:|:.  .:.:...|||               |:....|:...:.:
Mouse   471 IDKCLELAEYLYTIIKNREGYEMVFDGKPQHTNVCFWFVPPSLRTLEDNEERMSRLSKVAPVIKA 535

  Fly   426 IINESGKLHMVPASVGDRYIIRFCAVAQN--ATAEDIDYAWDIIVDFANEL 474
            .:.|.|...:....:||: :..|..|..|  ||.:|||:..:.|.....:|
Mouse   536 RMMEYGTTMVSYQPLGDK-VNFFRMVISNPAATHQDIDFLIEEIERLGQDL 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 102/420 (24%)
Gad2NP_032104.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Pyridoxal_deC 138..509 CDD:278699 100/402 (25%)
Substrate binding. /evidence=ECO:0000250 181..183 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835053
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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