DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and gad1a

DIOPT Version :10

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_002663350.1 Gene:gad1a / 100329827 ZFINID:ZDB-GENE-070912-472 Length:591 Species:Danio rerio


Alignment Length:505 Identity:125/505 - (24%)
Similarity:216/505 - (42%) Gaps:69/505 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MEMVEYICNYLETLNERRVTPSVEPGYLRHLLPP------EAPQEPEDWDQIMRDVEDKIMPGVT 69
            :|:||.:.||:....:|. |..::..:...||..      |...:||..:||:.|..|.:..|| 
Zfish   115 LEVVEILTNYVRKTFDRS-TKVLDFHHPHQLLEGMEGFNLELCDQPESLEQILVDCRDTLKYGV- 177

  Fly    70 HWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPDHFLA 134
            ...||||.....:|.....:.|:.|........|::..:|....:|.:.|..:.:.:|.|:    
Zfish   178 RTGHPRFFNQLSSGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIVGWPN---- 238

  Fly   135 LKEGSTGGGVIQTSASECVLVTMLAARAQALKRLK----AQHPFVEEGHLLSKLMAYCSKEAHSC 195
                ..|.|:.....:...:.:::.||.:....:|    |..|         :|:.:.|:.:|..
Zfish   239 ----GEGDGIFSPGGAISNMYSVMVARYKHYPEIKIKGMAAAP---------RLVLFTSEHSHYS 290

  Fly   196 VEKA-AMICF--VKLRILEPDDDASLRGQTIYEAME----EDELQGLVPFFVSTTLGTTGSCAFD 253
            ::|| |::.|  ..|.:|..|:    ||:.|...:|    :.:.:|.||.||:.|.|:|...|||
Zfish   291 IKKASAVLGFGTENLILLRTDE----RGRVIPADLEAKVIDAKQKGFVPMFVNATAGSTVYGAFD 351

  Fly   254 NLPEIGKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWV 318
            .:.||....::: .:|||||.|:.|...:..:.|..|.|||.|:|...||:|.:.....||.:.|
Zfish   352 PINEIADICEKY-NMWLHVDGAWGGGLLMSRKHKHKLSGIERANSVTWNPHKMMGVPLQCSAILV 415

  Fly   319 RDR--IRLTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHH 381
            |::  ::..:::....|:......|...|.....:...|.....|.|.:.:|.|.:|.:.:|...
Zfish   416 REKGLLQGCNSMCAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKSKGTTGFEKHIDRC 480

  Fly   382 IKLAKRFEELVLKDKRFEICNQVKLG-----LVCF-------RL--KGSDKLNE------KLLSI 426
            ::|:   |.|..|.|..|....|..|     .|||       ||  .|.:|.:.      |:.::
Zfish   481 LELS---EYLYHKIKNREGYEMVFQGEPQHTNVCFWYIPPSLRLLPDGEEKRHRLHKVAPKIKAL 542

  Fly   427 INESGKLHMVPASVGDRYIIRFCAVAQN--ATAEDIDYAWDIIVDFANEL 474
            :.|.|...:.....|:: :..|..|..|  .|..|||:..|.|.....:|
Zfish   543 MMECGTTMVGYQPQGEK-VNFFRMVVSNPAVTRSDIDFLIDEIERLGQDL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:395219 102/411 (25%)
gad1aXP_002663350.1 Pyridoxal_deC 141..515 CDD:395219 100/399 (25%)

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