DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and gad1.2

DIOPT Version :10

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_012819752.1 Gene:gad1.2 / 100145511 XenbaseID:XB-GENE-5830282 Length:554 Species:Xenopus tropicalis


Alignment Length:509 Identity:121/509 - (23%)
Similarity:210/509 - (41%) Gaps:79/509 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MEMVEYICNYLETL--NERRVTPSVEPGYLRHLLPP---EAPQEPEDWDQIMRDVEDKIMPGVTH 70
            :|::..:.|:::..  .|.:|.....|..|...|..   |...:||..:||:.|..|.:...: .
 Frog    78 IEVLRILLNHIKKTYDGESKVLDFHHPHQLLEGLEGFNLELSDQPEPLEQILVDCSDTLKYSI-K 141

  Fly    71 WQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPDHFLAL 135
            ..|||:......|.....:.|:.|........|::..:|....:|.|||..:.:.||..:     
 Frog   142 TGHPRYFNQLSCGLDIIGLAGEWLTATANTNMFTYEIAPVFIIMEEIVLKKMQEIIGWGE----- 201

  Fly   136 KEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSCVEKAA 200
               :...|:.....:...|.::.|||.:....:|.:....     |.:::.:.|:::|...:||:
 Frog   202 ---NEADGIFSPGGTISNLYSLQAARYKYFPMVKTKGMAA-----LPQIVIFTSEQSHYSFKKAS 258

  Fly   201 MICFV---KLRILEPDDDASLRGQTIYEAMEEDEL----QGLVPFFVSTTLGTTGSCAFDNLPEI 258
            .|..:   .:..::.|:    ||:.|...:|:..|    ||..||:||.|.|||...|||.|..|
 Frog   259 AILGIGTDNVIAIKCDE----RGKMIPSDLEDKILKAKRQGQHPFYVSATAGTTVYGAFDPLITI 319

  Fly   259 GKQLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDR-- 321
            ....:|: |:|:|||||:.|...:..:.:..:.|||.|:|...||:|.:.....||.:.:|.:  
 Frog   320 ADICKRY-GLWMHVDAAWGGGLLLSKKHRYKMNGIERANSVTWNPHKIMGVPLQCSAILIRQKGL 383

  Fly   322 IRLTSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISG----------LQH 376
            ::..:....|.|:......|.|.|.....:...|.....|||.:.::.|..|          |..
 Frog   384 LQACNQQCADYLFQMDKPYDTAYDTGDKTIQCGRHVDIFKLWLMWKAKGSCGFELQINRCLELSE 448

  Fly   377 YIRHHIKLAKRFEELVLKDKRFEICNQVKLGLVCF------------------RLKGSDKLNEKL 423
            |:.:.::....| |||.:||. |..|      |||                  ||   .|:..::
 Frog   449 YLYNKLQSKSNF-ELVFRDKP-EYTN------VCFWYIPPSLEHVPRDKEWKARL---HKIAPQI 502

  Fly   424 LSIINESGKLHMVPASVGDRYIIRFCAVAQNATAEDIDYAWDIIVDFANELLEK 477
            .:.:.|.|.:.:.....||:... |..|..|..::..|      |||..|.:|:
 Frog   503 KARMMEEGTVMVSYQPQGDKPNF-FRMVFSNPASKKSD------VDFLLEEIER 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:395219 102/418 (24%)
gad1.2XP_012819752.1 Pyridoxal_deC 104..478 CDD:395219 101/400 (25%)

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