DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and gad3

DIOPT Version :9

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001083039.2 Gene:gad3 / 100038790 ZFINID:ZDB-GENE-070424-80 Length:546 Species:Danio rerio


Alignment Length:511 Identity:126/511 - (24%)
Similarity:215/511 - (42%) Gaps:93/511 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIMPGVTHWQ 72
            ||..:::::  :|...|||     .:|...|      |.|.:|::.:|::.|..|.:..|| ...
Zfish    85 KRSTKVLDF--HYPHQLNE-----GLEGFSL------ELPDQPDNLEQLLVDCRDTLKYGV-KTG 135

  Fly    73 HPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPDHFLALKE 137
            ||||......|.....:.|:.|........|::..||....:|.:||..:...||.|:       
Zfish   136 HPRFFNQLSTGLDIVGLAGEWLTSTANTNMFTYEISPVFILMEEVVLRKMHTIIGWPE------- 193

  Fly   138 GSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGH---LLSKLMAYCSKEAHSCVEKA 199
             ..|.|:.....|...|.::|.||......:|.        |   .:.:|..:.|..:|..::|:
Zfish   194 -EDGDGIFCPGGSMSNLYSVLLARFHLFPAVKT--------HGMCAIPRLAMFTSAHSHYSIKKS 249

  Fly   200 AMICFV---KLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGKQ 261
            |.:..:   .:.::..|:...:....:..::||.:.:|||||:|:.|.|||...|||.|.:|. .
Zfish   250 AAVLGIGTENVIVVRCDERGKMISSELNSSIEEAKSKGLVPFYVNATAGTTVYGAFDPLHKIA-D 313

  Fly   262 LQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDR--IRL 324
            :....|:|:|||||:.|...:..:.:..|.|||.|.|...||:|.:.....|||:.|:.:  ::.
Zfish   314 ICEHHGLWMHVDAAWGGGLLLSNKHRVKLHGIERAHSVTWNPHKMMGVPLQCSTILVKRKGLLQQ 378

  Fly   325 TSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRH--------H 381
            .:.|..:.|:....:.:.:.|.....:...|.....|||.:.::.|..|.:..:.|        :
Zfish   379 CNQLCAEYLFQPDKHYEVSYDTGDKSIQCGRHVDIFKLWLMWKAKGSEGFESQVNHCLENAEYLY 443

  Fly   382 IKLAKRFE-ELVLKDKRFEICNQVKLGLVCF-----RLK----GSDKLNEKLLSIINESGKLHMV 436
            .||.:|.: :||.|.|. |..|      |||     |::    |.::..|           ||||
Zfish   444 YKLKRRTDFQLVFKGKP-EHSN------VCFWYLPKRVQNIPLGPEREKE-----------LHMV 490

  Fly   437 PASVGDRYI---------------IRF--CAVAQNAT-AEDIDYAWDIIVDFANEL 474
            ...:..:.:               :.|  |..:..|| .||:|:..|.||....||
Zfish   491 APKIKTKMMEEGFTMIGYQPLEDKVNFFRCVFSNPATQREDVDFLLDEIVRLGCEL 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 101/400 (25%)
gad3NP_001083039.2 Pyridoxal_deC 96..469 CDD:278699 104/408 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578194
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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