DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdc2 and gad3

DIOPT Version :10

Sequence 1:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001083039.2 Gene:gad3 / 100038790 ZFINID:ZDB-GENE-070424-80 Length:546 Species:Danio rerio


Alignment Length:511 Identity:126/511 - (24%)
Similarity:215/511 - (42%) Gaps:93/511 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIMPGVTHWQ 72
            ||..:::::  :|...|||     .:|...|      |.|.:|::.:|::.|..|.:..|| ...
Zfish    85 KRSTKVLDF--HYPHQLNE-----GLEGFSL------ELPDQPDNLEQLLVDCRDTLKYGV-KTG 135

  Fly    73 HPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPDHFLALKE 137
            ||||......|.....:.|:.|........|::..||....:|.:||..:...||.|:       
Zfish   136 HPRFFNQLSTGLDIVGLAGEWLTSTANTNMFTYEISPVFILMEEVVLRKMHTIIGWPE------- 193

  Fly   138 GSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGH---LLSKLMAYCSKEAHSCVEKA 199
             ..|.|:.....|...|.::|.||......:|.        |   .:.:|..:.|..:|..::|:
Zfish   194 -EDGDGIFCPGGSMSNLYSVLLARFHLFPAVKT--------HGMCAIPRLAMFTSAHSHYSIKKS 249

  Fly   200 AMICFV---KLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGKQ 261
            |.:..:   .:.::..|:...:....:..::||.:.:|||||:|:.|.|||...|||.|.:|. .
Zfish   250 AAVLGIGTENVIVVRCDERGKMISSELNSSIEEAKSKGLVPFYVNATAGTTVYGAFDPLHKIA-D 313

  Fly   262 LQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDR--IRL 324
            :....|:|:|||||:.|...:..:.:..|.|||.|.|...||:|.:.....|||:.|:.:  ::.
Zfish   314 ICEHHGLWMHVDAAWGGGLLLSNKHRVKLHGIERAHSVTWNPHKMMGVPLQCSTILVKRKGLLQQ 378

  Fly   325 TSALVVDPLYLKHGYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRH--------H 381
            .:.|..:.|:....:.:.:.|.....:...|.....|||.:.::.|..|.:..:.|        :
Zfish   379 CNQLCAEYLFQPDKHYEVSYDTGDKSIQCGRHVDIFKLWLMWKAKGSEGFESQVNHCLENAEYLY 443

  Fly   382 IKLAKRFE-ELVLKDKRFEICNQVKLGLVCF-----RLK----GSDKLNEKLLSIINESGKLHMV 436
            .||.:|.: :||.|.|. |..|      |||     |::    |.::..|           ||||
Zfish   444 YKLKRRTDFQLVFKGKP-EHSN------VCFWYLPKRVQNIPLGPEREKE-----------LHMV 490

  Fly   437 PASVGDRYI---------------IRF--CAVAQNAT-AEDIDYAWDIIVDFANEL 474
            ...:..:.:               :.|  |..:..|| .||:|:..|.||....||
Zfish   491 APKIKTKMMEEGFTMIGYQPLEDKVNFFRCVFSNPATQREDVDFLLDEIVRLGCEL 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:395219 101/400 (25%)
gad3NP_001083039.2 Pyridoxal_deC 96..469 CDD:395219 104/408 (25%)

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