DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opbp and Sry-delta

DIOPT Version :9

Sequence 1:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster


Alignment Length:522 Identity:113/522 - (21%)
Similarity:177/522 - (33%) Gaps:194/522 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DLSGGALQQEFLYCESCGNVYEDTESYD----RAHGPQAGCCTGASGEL--DF-IEEVAEDCISE 77
            ||..||        ..|...:::...||    .....|....|...|.|  :| :.|..||.:.|
  Fly    53 DLKPGA--------RLCPRCFQELSDYDTIMVNLMTTQKRLTTQLKGALKSEFEVPESGEDILVE 109

  Fly    78 EVGEEDIVYADVPLWELVEEVPANVKAE-------KDQNEPSNS-DRYFCYDCHSIFENRNKAEE 134
            ||   :|..:||       |..|:.:|:       |||.|.... .|.|..:...  |:.:..:|
  Fly   110 EV---EIPQSDV-------ETDADAEADALFVELVKDQEESDTEIKREFVDEEEE--EDDDDDDE 162

  Fly   135 HICPRAESGGS-----SQQDGDAKAPVRRKLASVSARTGPRDASSVISCGICNTVFSSEKFLKFH 194
            .||...:.|.|     ...||:.: |.::::..              .|..|..|::|...|:.|
  Fly   163 FICEDVDVGDSEALYGKSSDGEDR-PTKKRVKQ--------------ECTTCGKVYNSWYQLQKH 212

  Fly   195 MRIHENRAPKSIQDALPIGAHQQYSELDQFYCEICNKSFDETLLTVHKQMHQQESSEIMCSICNR 259
            :....::.|..|                                               |.||..
  Fly   213 ISEEHSKQPNHI-----------------------------------------------CPICGV 230

  Fly   260 KFENEVTYQMHQKIHEKPRDSESSRKLAQRTSLDKEKPGFPCQYCERVFTRPFEKVKHERVHTGE 324
            ...:|...::|..:||...:.:                   |:||.:.|:||...::|.|:|..:
  Fly   231 IRRDEEYLELHMNLHEGKTEKQ-------------------CRYCPKSFSRPVNTLRHMRMHWDK 276

  Fly   325 KPYACEVCGKTFRVSYSLTLH-LRTHTNIRPYVCTVCNKRFKSHQVYSHHLRIHSSERQFSCDAC 388
            |.|.||.||..|.....|..| ||......|.:|::||..|||.:.::||..||...|       
  Fly   277 KKYQCEKCGLRFSQDNLLYNHRLRHEAEENPIICSICNVSFKSRKTFNHHTLIHKENR------- 334

  Fly   389 PKTFRTSVQLYAHKNTHTKPYRCAVCNRPFSSMYAVKNHMQTHKEISSKGSVGSGTPNIKSAATS 453
            |:.:                  |:||.:.|:..|.:|.||:||     :|.|..|   ::..|.:
  Fly   335 PRHY------------------CSVCPKSFTERYTLKMHMKTH-----EGDVVYG---VREEAPA 373

  Fly   454 KSQAAGKFYCNTCGAEYARLFALRLHMKSAHGLVEEQENPATSTDAAHVAETDDSETAVLIAAAE 518
            ..|.                            :|||          .|| :.|:||.||.:..::
  Fly   374 DEQQ----------------------------VVEE----------LHV-DVDESEAAVTVIMSD 399

  Fly   519 AD 520
            .|
  Fly   400 ND 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OpbpNP_724479.1 C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
C2H2 Zn finger 301..321 CDD:275368 8/19 (42%)
zf-H2C2_2 316..336 CDD:290200 9/19 (47%)
C2H2 Zn finger 329..349 CDD:275368 9/20 (45%)
zf-H2C2_2 341..366 CDD:290200 9/25 (36%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..405 CDD:275368 1/19 (5%)
C2H2 Zn finger 411..431 CDD:275368 8/19 (42%)
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 55/250 (22%)
C2H2 Zn finger 225..245 CDD:275368 5/19 (26%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..327 CDD:275370 7/16 (44%)
zf-C2H2 337..359 CDD:278523 8/39 (21%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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