DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opbp and Neu2

DIOPT Version :9

Sequence 1:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:454 Identity:108/454 - (23%)
Similarity:161/454 - (35%) Gaps:156/454 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CESC----GNVYEDTESYDRAHGPQAGCCTGASGELDFIEEVAEDCISEEVGEEDIVYADVPLWE 93
            |:||    .|.::..|:|:|:|           ....|:::|.|: .||..|.           .
  Fly    38 CKSCLEDAQNAFDIIETYERSH-----------QFYRFLKDVREE-ESENDGS-----------G 79

  Fly    94 LVEEVPANVKAEKDQNEPSNSDRYFCYDCHSIFENRNKAEEHICPRAESGGSSQQDGDAKAPVRR 158
            ..|||.|   ||:|..:.::.           .::.|:.:.:.|                     
  Fly    80 CSEEVEA---AERDLQDGADD-----------VDSGNEPDINEC--------------------- 109

  Fly   159 KLASVSARTGPRDASSVISCGICNTVFSSEKFLKFHMRIHENRAPKSIQDALPIGAHQQYSELDQ 223
               .:.|:..|.     .||..|...|..:..||.|||.|....|                    
  Fly   110 ---DIKAKEKPG-----FSCSHCPKSFQVKSNLKVHMRSHTGERP-------------------- 146

  Fly   224 FYCEICNKSFD-ETLLTVHKQMHQQESSEIMCSICNRKFENEVTYQMHQKIHEKPRDSESSRKLA 287
            |.|.:|.|||. .:.|..|.:.|..| ....||.|.|.|......:.|.::||:           
  Fly   147 FTCSLCPKSFGYSSGLQNHMRTHTGE-RPFQCSHCPRSFTAGHHLKAHIQMHER----------- 199

  Fly   288 QRTSLDKEKPGFPCQYCERVFTRPFEKVKHERVHTGEKPYACEVCGKTFRVSYSLTLHLRTHTNI 352
             |.||       .|.||::.|.......:|...||.|..:.|..|.|:|:|.:.|.:|:|.|.. 
  Fly   200 -RGSL-------RCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQE- 255

  Fly   353 RPYVCTVCNKRFKSHQVYSHHLRIHSSERQFS---------------CDACPKTF--RTSVQLY- 399
            |.:.|..|:|.|..|.....||..::...|.|               |..|||||  |:::..: 
  Fly   256 RLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHL 320

  Fly   400 ---------------------AHKNTHTKPYRCAVCNRPFSSMYAVKNHMQTHKEISSKGSVGS 442
                                 ||.|...||::|:.|.|.||...|:..|:|||     .|.:|:
  Fly   321 KSHTKNKPLLEGPCKSSGSKPAHSNAQRKPFKCSSCPRTFSRKSALLTHLQTH-----TGKLGT 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OpbpNP_724479.1 C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
zf-H2C2_2 316..336 CDD:290200 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
zf-H2C2_2 341..366 CDD:290200 9/24 (38%)
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..405 CDD:275368 10/43 (23%)
C2H2 Zn finger 411..431 CDD:275368 8/19 (42%)
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 8/35 (23%)
COG5048 <119..241 CDD:227381 43/161 (27%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
zf-H2C2_2 133..158 CDD:290200 13/44 (30%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
zf-H2C2_2 162..185 CDD:290200 8/23 (35%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
zf-C2H2_8 206..286 CDD:292531 24/80 (30%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 9/36 (25%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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