DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opbp and indra

DIOPT Version :10

Sequence 1:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_728599.1 Gene:indra / 38159 FlyBaseID:FBgn0035213 Length:733 Species:Drosophila melanogaster


Alignment Length:470 Identity:92/470 - (19%)
Similarity:147/470 - (31%) Gaps:167/470 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 DCHS-IFEN--RNKAEEHICPRAESGGSSQQDGDAKAPVRRKLASVSARTGPRDASS-----VIS 177
            |.|| .||:  :.||:|.....|:||..::.|..||     :..:||.|..|::..|     .|.
  Fly   280 DTHSRTFESEAKTKAKESKEKEAKSGAKNKIDAKAK-----ETNAVSQRKKPKEKKSKEKKTEIK 339

  Fly   178 CGICNTVFS-------------------------------SEKFLKFHMRIHENRAPKSIQDAL- 210
            |.:...|..                               :|..:|  .|:.||........|: 
  Fly   340 CNVETKVVDEIDDQVNNKKGTDSEDADQTQATKIASFKALNESLMK--KRMLENVIDSEYTFAIN 402

  Fly   211 PIGAHQQYSELDQFYCEICN------KSFDETLLTVHKQMHQQESSEIMCSICNRKFENEVTYQM 269
            ...|....::.:.|.||||:      |...|.:.|||.   ..:.....|.:|.:....:.:.:.
  Fly   403 GSSASTPRADSNNFQCEICDCELMTAKQMQEHMKTVHS---IDKPKVFKCHVCEKSLATKQSLKT 464

  Fly   270 HQKIH-------------------------------------EKPRDSESS---------RKLAQ 288
            |..:|                                     |.|:.|:.|         ||:.|
  Fly   465 HMTLHADGAEAPNSSKRKILQDEDEDVDILGTTQIENTAEKVEGPKKSQQSPTKAAKFTNRKILQ 529

  Fly   289 ---------------RTSLDKEKPGFPCQYCERVFTRPFEKVKHERVHTG----EKPYACEVCGK 334
                           .|:.|.|.|      .|....|....::|: |..|    ..|     ..|
  Fly   530 EEDEVVEIVDAFKTDNTAEDDEGP------AEEKIIRSRNNIQHQ-VDGGMIAPRSP-----AKK 582

  Fly   335 TFRVSYSLTLHLRTHTNIRPYVCTVCNKRFKSH-----------QVYSHHLRIH----------- 377
            |.:.|: :.|.:.|.....|.......|:.||.           :..::::|.|           
  Fly   583 TKKTSH-VDLSVSTTNGNSPAKSEKRKKQDKSEDTLPSSDVDIVEEINYNVRPHKKARLESIGDS 646

  Fly   378 -SSERQFSCDACPKTFRTSVQLYAH-KNTHTKPYRCAVCNRPFSSMYAVKNHMQTHKEISSKGSV 440
             :.|...|||.|.|..::..:|.:| :..|....:|.:|...:      :|.|......|:.||.
  Fly   647 TADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVY------QNQMDYVAHFSNCGSE 705

  Fly   441 GS---GTPNIKSAAT 452
            |.   |..|.|...|
  Fly   706 GGLPCGVANCKKVFT 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OpbpNP_724479.1 COG5048 <185..433 CDD:227381 62/374 (17%)
C2H2 Zn finger 254..274 CDD:275368 3/19 (16%)
C2H2 Zn finger 301..321 CDD:275368 3/19 (16%)
SFP1 <323..373 CDD:227516 11/64 (17%)
C2H2 Zn finger 329..349 CDD:275368 4/19 (21%)
C2H2 Zn finger 357..377 CDD:275368 4/30 (13%)
C2H2 Zn finger 385..405 CDD:275368 6/20 (30%)
C2H2 Zn finger 411..431 CDD:275368 4/19 (21%)
indraNP_728599.1 SUF4-like 418..499 CDD:411020 13/83 (16%)
C2H2 Zn finger 418..439 CDD:411020 7/20 (35%)
C2H2 Zn finger 418..439 CDD:275370 7/20 (35%)
C2H2 Zn finger 449..469 CDD:411020 3/19 (16%)
C2H2 Zn finger 449..469 CDD:275370 3/19 (16%)

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