DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opbp and Zfp143

DIOPT Version :9

Sequence 1:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001012169.2 Gene:Zfp143 / 361627 RGDID:1305662 Length:638 Species:Rattus norvegicus


Alignment Length:355 Identity:100/355 - (28%)
Similarity:147/355 - (41%) Gaps:82/355 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 DSESSRKL-------AQRTSLDKEKPG---FPCQY--CERVFTRPFEKVKHERVHTGEKPYACE- 330
            ::|..:|:       |.|.:...::.|   |.|:|  |.:::|.......|||.|||::||.|| 
  Rat   207 ENEQEKKMQIVLQGHATRVTPKSQQSGEKAFRCKYDGCGKLYTTAHHLKVHERSHTGDRPYQCEH 271

  Fly   331 -VCGKTFRVSYSLTLHLRTHTNIRPYVCTV--CNKRFKSHQVYSHHLRIHSSERQFSC--DACPK 390
             .|||.|...|.|..|.||||..:||.|:.  |.|.||:......|:|.|:.||.|.|  :.|.:
  Rat   272 SGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRTHTGERPFKCPIEGCGR 336

  Fly   391 TFRTSVQLYAHKNTHT--KPYRCAV--CNRPFSSMYAVKNHMQTHKEISSKGSVGSGTPNIKSAA 451
            :|.||.....|..|||  :||.|..  |.|.|:|....|||::.|  ...|..|.: .|......
  Rat   337 SFTTSNIRKVHIRTHTGERPYYCTEPGCGRAFASATNYKNHVRIH--TGEKPYVCT-VPGCDKRF 398

  Fly   452 TSKSQA---------AGKFYCNTCGAEYARLFALRLHMKSAHG----LVEEQE------------ 491
            |..|..         :..:.||.||..|.::..|.:|.::||.    :.||||            
  Rat   399 TEYSSLYKHHVVHTHSKPYNCNHCGKTYKQISTLAMHKRTAHNDTEPIEEEQEAFFEPPPGQGDD 463

  Fly   492 ---------------NPATSTDAAHVAETDDSETAVLIAAAEADAAYINAVVNDVDIVG------ 535
                           ....||..|.|.::..|:...||  ::....::|....|:..:|      
  Rat   464 VLKGSQITYVTGVEGEDIVSTQVATVTQSGLSQQVTLI--SQDGTQHVNISQADMQAIGNTITMV 526

  Fly   536 -------TVPTYEECVVFDVDNFHSEEVIT 558
                   ||||::  .|......||..::|
  Rat   527 TQDGTPITVPTHD--AVISSAGTHSVAMVT 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OpbpNP_724479.1 C2H2 Zn finger 254..274 CDD:275368
C2H2 Zn finger 301..321 CDD:275368 7/21 (33%)
zf-H2C2_2 316..336 CDD:290200 13/21 (62%)
C2H2 Zn finger 329..349 CDD:275368 10/21 (48%)
zf-H2C2_2 341..366 CDD:290200 12/26 (46%)
C2H2 Zn finger 357..377 CDD:275368 7/21 (33%)
C2H2 Zn finger 385..405 CDD:275368 6/21 (29%)
C2H2 Zn finger 411..431 CDD:275368 8/21 (38%)
Zfp143NP_001012169.2 SFP1 <207..292 CDD:227516 29/84 (35%)
C2H2 Zn finger 239..261 CDD:275368 7/21 (33%)
COG5048 <251..424 CDD:227381 62/175 (35%)
C2H2 Zn finger 269..291 CDD:275368 10/21 (48%)
C2H2 Zn finger 299..321 CDD:275368 7/21 (33%)
C2H2 Zn finger 329..351 CDD:275368 6/21 (29%)
C2H2 Zn finger 359..381 CDD:275368 8/21 (38%)
C2H2 Zn finger 389..411 CDD:275368 3/22 (14%)
C2H2 Zn finger 419..438 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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