DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opbp and si:ch73-40a17.4

DIOPT Version :10

Sequence 1:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_005171145.1 Gene:si:ch73-40a17.4 / 100149710 ZFINID:ZDB-GENE-131127-71 Length:408 Species:Danio rerio


Alignment Length:380 Identity:102/380 - (26%)
Similarity:148/380 - (38%) Gaps:90/380 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YFCYDCHSIFENRNKAEEH----------ICPRAESGGSSQQDGDAKAPVRRKLASVSARTGPRD 171
            |.|..|...|..:...::|          :||  :.|.|..:..|.|..:|       ..||.:.
Zfish   100 YTCIQCQKSFTCKGSLKDHCKIHSGEKPFMCP--QCGWSFARQEDLKRHIR-------IHTGEKP 155

  Fly   172 ASSVISCGICNTVFSSEKFLKFHMRIHENRAPKSIQDALPIGAHQQYSELDQFYCEICNKSFDET 236
                .||..|...|:|...|:.|:|||....|                    |.|..|.|||.:.
Zfish   156 ----FSCAQCTKSFTSSGDLRRHVRIHSGERP--------------------FSCAQCKKSFTQK 196

  Fly   237 L-LTVHKQMHQQESSEIMCSICNRKFENEVTYQMHQKIHEKPRDSESSRKLAQRTSLDKEKPGFP 300
            . |..|.::|..|.. ..|.:|.:.|.::.:.:.|.|:|       |..||.|            
Zfish   197 EGLKEHAKIHSGEKL-FACMLCGKSFTHQRSLKRHMKVH-------SGEKLHQ------------ 241

  Fly   301 CQYCERVFTRPFEKVKHERVHTGEKPYACEVCGKTFRVSYSLTLHLRTHTNIRPYVCTVCNKRFK 365
            |..|.|.|........|...||||:|::||.|.|.|.::..|..|:|.|.:.|.|||:.|.|.|.
Zfish   242 CPECGRRFAEAGNLKTHLLSHTGERPFSCEKCEKKFFLAVHLKTHMRIHEDERRYVCSFCGKSFL 306

  Fly   366 SHQVYSHHLRIHSSERQFSCDACPKTFRTSVQLYAHKNTHT--KPYRCAVCNRPFSSMYAVKNHM 428
            ....:..|.:.|..|:.:.|..|..||....:|..|:..||  |||:|:.|.:.|:...|:|.|.
Zfish   307 WLNGFKDHQKTHIGEKPYVCLECGSTFIRPGELKVHERIHTGEKPYKCSHCEKSFTQSGALKIHK 371

  Fly   429 QTHKEISSKGSVGSGTPNIKSAATSKSQAAGKFYCNTCGAEYARLFALRLHMKSA 483
            :.|                    |.:.    .:.|.|||..::|...|..|:|.|
Zfish   372 RVH--------------------TGEK----PYLCPTCGKTFSRYGNLGKHLKKA 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OpbpNP_724479.1 COG5048 <185..433 CDD:227381 75/250 (30%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
C2H2 Zn finger 301..321 CDD:275368 5/19 (26%)
SFP1 <323..373 CDD:227516 19/49 (39%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 5/19 (26%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
C2H2 Zn finger 411..431 CDD:275368 6/19 (32%)
si:ch73-40a17.4XP_005171145.1 zf-C2H2 72..94 CDD:395048
C2H2 Zn finger 74..94 CDD:275368
zf-H2C2_2 86..111 CDD:463886 4/10 (40%)
C2H2 Zn finger 102..122 CDD:275368 4/19 (21%)
COG5048 126..>401 CDD:227381 95/351 (27%)
C2H2 Zn finger 130..150 CDD:275368 7/28 (25%)
C2H2 Zn finger 158..178 CDD:275368 7/19 (37%)
C2H2 Zn finger 186..206 CDD:275368 7/19 (37%)
C2H2 Zn finger 214..234 CDD:275368 5/19 (26%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 270..290 CDD:275368 8/19 (42%)
C2H2 Zn finger 298..318 CDD:275368 5/19 (26%)
C2H2 Zn finger 326..346 CDD:275368 6/19 (32%)
C2H2 Zn finger 354..374 CDD:275368 6/19 (32%)
C2H2 Zn finger 382..400 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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