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Protein Alignment IFT20 and Ift20
DIOPT Version :9
Sequence 1: | NP_724409.3 |
Gene: | IFT20 / 246616 |
FlyBaseID: | FBgn0050441 |
Length: | 131 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099285.1 |
Gene: | Ift20 / 287541 |
RGDID: | 1309400 |
Length: | 157 |
Species: | Rattus norvegicus |
Alignment Length: | 123 |
Identity: | 41/123 - (33%) |
Similarity: | 71/123 - (57%) |
Gaps: | 0/123 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LQKVGVFIDEIYTVRVEHPNLSSSKIMFKQECFNYIKAFTIFKKFVFNYCNISETFAKDVDKEKL 68
|.:.|:..||:..:||..|.::......|:||.:::.....|:|.|.....:.:..||:.:.||:
Rat 31 LGEAGLHFDELNKLRVLDPEVTQQTTELKEECKDFVDKIGQFQKIVGGLIELVDQLAKEAENEKM 95
Fly 69 RAIGTQNQLKTAFIQRQNKQQVYQYEIFEQTVELERLKGELQFLQRIETEQHEIINNF 126
:|||.:|.||:...||:.:||..|..|.|:.::|||.:.|.:.|.::|.||:|.|:.|
Rat 96 KAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEALCKVEAEQNEFIDQF 153
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
IFT20 | NP_724409.3 |
IFT20 |
8..126 |
CDD:291592 |
39/117 (33%) |
Ift20 | NP_001099285.1 |
IFT20 |
36..144 |
CDD:405600 |
33/107 (31%) |
Information from Original Tools:
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