DRSC/TRiP Functional Genomics Resources

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Protein Alignment cGlr2 and Cgas

DIOPT Version :10

Sequence 1:NP_001400984.1 Gene:cGlr2 / 246606 FlyBaseID:FBgn0050424 Length:459 Species:Drosophila melanogaster
Sequence 2:XP_038938458.1 Gene:Cgas / 682147 RGDID:1586939 Length:510 Species:Rattus norvegicus


Alignment Length:420 Identity:93/420 - (22%)
Similarity:161/420 - (38%) Gaps:120/420 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KKYVDIPKDEGQRYGKHYEALTSKIFEILRK-ENPELDIIIAEFSLEGSVGDMLKIAKPNEFDLV 83
            ||.:|..:.:.:......|.:...:.::||: :..|.:....|....||..:.:||:.|||||::
  Rat   154 KKVLDKLRLKRKEISAAAETVNKVVDQLLRRMQRRESEFKGVEQLNTGSYYEHVKISAPNEFDVM 218

  Fly    84 FKLKFP------YYKSIAVTR--DPKIP-GNVL--------LDMTRVLELLKDDPREDFQRIREL 131
            |||:.|      ||::.|..|  ..:|| ||.|        |..|:||           .:.|||
  Rat   219 FKLEVPRIELEEYYETGAFYRVKFKRIPRGNPLSHFLEGEVLSATKVL-----------SKFREL 272

  Fly   132 IQGRLVDAQNFFVVDRLRSWLQSLFSQALNRISYRVELVAGVVSHLKYRTCGPAHTIYVYGDYEY 196
            |:..:.:.::..|.                     ||         :.:...||.|:.:....|.
  Rat   273 IKEEVKEIKDTDVT---------------------VE---------EEKPGSPAVTLLIRNPEEI 307

  Fly   197 SVDYVPAICLAAE---------------QNVLPTKQLECFKRANTSYWEAIPKPLKPLTETSMIS 246
            |||    |.||.|               |:.|.||.....:|   ..:..:||..|........:
  Rat   308 SVD----IILALESKGSWPISTKGGLPIQDWLGTKVRTNLRR---EPFYLVPKNAKDGNRFQGET 365

  Fly   247 FRSSFYAVEKILLQD--VHENC----------RNAIRFMK--------KFRDVKTNLGNCKSYYI 291
            :|.||...||.:|.:  :.:.|          :..::.||        :|:::.   ..| ||::
  Rat   366 WRLSFSHTEKYILNNHGIGKTCCESSGAKCCRKECLKLMKYLLEQLKREFQELD---AFC-SYHV 426

  Fly   292 KTLFLWKIIQEPESYWLNPLSFILADMFDD----LAENLRRGVITFFWDPELNMIDALTRDQVWE 352
            ||.......::|:....:|.:  |:..||.    ..|.||...:..::.|:.|:......|:..:
  Rat   427 KTAIFHMWTKDPQDSQWDPRN--LSTCFDKFLTFFLECLRTEKLDHYFIPKFNLFSQELIDKKSK 489

  Fly   353 MYLCVQRIPRDLRGAEISRNKWSFFVLREF 382
            .:|. ::|       |..||. .|.:..:|
  Rat   490 EFLS-EKI-------EYERNN-GFPIFNKF 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cGlr2NP_001400984.1 Mab-21 69..261 CDD:460873 56/223 (25%)
Mab-21_C 265..359 CDD:466416 21/115 (18%)
CgasXP_038938458.1 PHA03247 <2..143 CDD:223021
Mab-21 203..380 CDD:460873 56/224 (25%)
Mab-21_C 396..498 CDD:466416 21/115 (18%)
Blue background indicates that the domain is not in the aligned region.

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