DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and BDF1

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_013503.1 Gene:BDF1 / 851115 SGDID:S000004391 Length:686 Species:Saccharomyces cerevisiae


Alignment Length:265 Identity:67/265 - (25%)
Similarity:109/265 - (41%) Gaps:61/265 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQETERSSPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLN 68
            |.:::|....:..|:.::|.|.:..:.:..:.|.||:||..:.|..|.:.|:|||||.|:..:||
Yeast   308 KPKSKRLQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLN 372

  Fly    69 TGCYLSAADFAKDIRLIFYNTYLYTNPDHLCYH-MAKQLQIIFEEMYS---QVQLYICSSGSKVR 129
            ...|.:..||.:|:||:|.|.|.: |||....: |..:|:.:|...::   .:..|         
Yeast   373 DWQYQTMEDFERDVRLVFKNCYTF-NPDGTIVNMMGHRLEEVFNSKWADRPNLDDY--------- 427

  Fly   130 AEEESSSDESDSSSPEDEVNGSEVSPSIMGAPPSCTPTTECTPTPDWTPPATLETSEQQEPFTTE 194
            ..:|.|..:.|....|.|.:.|::..:|:                  |.||.....||......|
Yeast   428 DSDEDSRTQGDYDDYESEYSESDIDETII------------------TNPAIQYLEEQLARMKVE 474

  Fly   195 EDLDLHAKIQQLDGEVLLHVIHFIQRMEGAEYCNKELEFDICKLKVHTKRGIRDYLASKGFTGKR 259
                    :|||..:.|             |...||...    .:...|||.|    |||.:|.:
Yeast   475 --------LQQLKKQEL-------------EKIRKERRL----ARGSKKRGKR----SKGRSGSK 510

  Fly   260 VARTK 264
            .|.:|
Yeast   511 NASSK 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 34/101 (34%)
BET 190..252 CDD:435704 12/61 (20%)
BDF1NP_013503.1 COG5076 1..373 CDD:227408 20/64 (31%)
Bromodomain <339..417 CDD:445827 31/78 (40%)
PTZ00108 <386..647 CDD:240271 42/187 (22%)
BET 527..589 CDD:435704
Blue background indicates that the domain is not in the aligned region.

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