DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and AT1G58025

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001185257.1 Gene:AT1G58025 / 842169 AraportID:AT1G58025 Length:582 Species:Arabidopsis thaliana


Alignment Length:287 Identity:66/287 - (22%)
Similarity:105/287 - (36%) Gaps:90/287 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQETERSSPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLN 68
            |||.|.|       .::||::..   ...|..|..|::|:.||:.||.:|::.|||..|:.:...
plant   213 KQELEDS-------LIVIKKIMK---MEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFE 267

  Fly    69 TG-CYLSAADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQVQLYICSS-------G 125
            .| .|:::.|..||:..|:.|...|.........:.|:::..|.:.::...||...|       |
plant   268 KGNKYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTSAGLYTEQSAAENTEDG 332

  Fly   126 SKVRAEEES--------SSD---------------ESDSSSPEDEVNGSEVSPSIMGAPPSCTPT 167
            .|...:::|        .||               |.||.:.|      |.||:  |:|      
plant   333 GKASTKQKSHKRHGRHHKSDCMCAICVLKRRKRERERDSGAQE------ESSPA--GSP------ 383

  Fly   168 TECTPTPDWTPPATLETSEQQEPFTTEEDLDL---------HAKIQQLDGEV--LLHVIHFIQRM 221
                             |.........||:|:         ..:|.:||..|  ...||...|.:
plant   384 -----------------SVDNSSVNMGEDMDIDVDKKPEQEKTEIVELDSPVSKTQRVIENKQEV 431

  Fly   222 EGAEYCNKELEFDICKLKVHTKRGIRD 248
            |..|  |.|:|.:     ..||..:.|
plant   432 EEEE--NVEVESE-----NKTKANVED 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 25/101 (25%)
BET 190..252 CDD:435704 18/70 (26%)
AT1G58025NP_001185257.1 Bromodomain_1 212..314 CDD:99926 30/110 (27%)

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