DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-3 and NPX1

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_201137.5 Gene:NPX1 / 836452 AraportID:AT5G63320 Length:1061 Species:Arabidopsis thaliana


Alignment Length:285 Identity:68/285 - (23%)
Similarity:110/285 - (38%) Gaps:79/285 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQETERSSPEINA------------CKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVRE 56
            ||..::....:|.            |:.::.||:|  :|: .|.|..|:||.:|.:.||..:::.
plant   140 KQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWS--HKS-GWPFRTPVDPVMLNIPDYFNVIKH 201

  Fly    57 PMDLSTVRHRLNTGCYLSAADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQVQLYI 121
            ||||.|:|.||..|.|.|..|||.|:||.|.|:..|..|.:..:.||:.:...||..:..::..|
plant   202 PMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKI 266

  Fly   122 CSSGSKVRAEEESSSDESD-------SSSPEDEVNGSEVSPSIMGAPPSCTPTTECTPTPDWTPP 179
            ..|...|.....|:|.||:       ....|..:|.:::.                      ..|
plant   267 PMSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMNDNKLR----------------------VEP 309

  Fly   180 ATLETSE------QQEPFTTEEDL---------------------DLHAKIQQLDGEVLLHVIHF 217
            |.|..::      .|:....|||.                     ::...|:.|..|:|..|...
plant   310 AKLVMTDGEKKKLGQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKL 374

  Fly   218 I--------QRMEGAEYCNKELEFD 234
            :        :.||.:|.|..|:..|
plant   375 LDDYLREKKKSMEKSEPCEMEIVHD 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 39/112 (35%)
BET 190..252 CDD:435704 14/74 (19%)
NPX1NP_201137.5 Bromo_plant1 161..259 CDD:99938 38/100 (38%)
BET 313..377 CDD:435704 9/63 (14%)
2A1904 <770..>1025 CDD:273344
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.