DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and GTE2

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_196617.2 Gene:GTE2 / 830920 AraportID:AT5G10550 Length:581 Species:Arabidopsis thaliana


Alignment Length:312 Identity:86/312 - (27%)
Similarity:120/312 - (38%) Gaps:82/312 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 INACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAADF 78
            :..|..|:.:|....:   :|||..|:|...|||||||.||.:||||.||:..|..|.|.|..||
plant   175 MTTCGQILVKLMKHKW---SWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDF 236

  Fly    79 AKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQVQLYICSSGSKVRAEEESSSDESDSSS 143
            |.|:||.|.|...| ||      ..:.:.::.|::.||..::...:..:..|:|......|....
plant   237 ASDVRLTFTNAMSY-NP------KGQDVYLMAEKLLSQFDVWFNPTLKRFEAQEVKVMGSSSRPG 294

  Fly   144 PEDEV-------------NGSE----------VSPSIMGAPPSCTPTTECT-----------PTP 174
            |||..             .|.|          |.|.:...||  .|..|.|           |.|
plant   295 PEDNQRVWNQNNVAENARKGPEQISIAKKLDSVKPLLPTLPP--PPVIEITRDPSPPPSPVQPPP 357

  Fly   175 DWTPP--------ATLETSE-----------------QQEPFTTEEDLDLHAKIQQLDGEVLLHV 214
            ..:||        |:||..|                 .:...|.:|...|...:|:|..|.|..:
plant   358 PPSPPPQPVNQVEASLEVRETNKGRKGKLPKPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQL 422

  Fly   215 IHFI-QRMEGAEYCNKELEFDICKLKVHT----KRGIRDY--LASK----GF 255
            |..: :|.........|:|.||..|...|    .|.:.:|  :|||    ||
plant   423 IQILRKRTRDLPQDGDEIELDIEALDNETLWELDRFVTNYRKMASKIKRQGF 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 39/99 (39%)
GTE2NP_196617.2 Bromo_plant1 174..272 CDD:99938 41/106 (39%)
BET 398..461 CDD:407211 16/62 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1066
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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