DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and E(bx)

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster


Alignment Length:115 Identity:33/115 - (28%)
Similarity:59/115 - (51%) Gaps:13/115 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SSPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLS 74
            :|.::...|.:||::  ..:|: ||.|.||:||:  ...||:::::|||||..:..:|.:..|..
  Fly  2650 TSNDVEELKNLIKQM--QLHKS-AWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTK 2709

  Fly    75 AADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIF--------EEMYSQ 116
            .::|..|:..||.|...|...:...|..|:.|:..|        |.::.|
  Fly  2710 LSEFIGDMTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRENVFDQ 2759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 31/108 (29%)
E(bx)NP_001261188.1 DDT 190..245 CDD:280886
WHIM1 288..337 CDD:292246
PHD1_BPTF 341..383 CDD:277034
BAH 361..>438 CDD:295389
TNG2 <2423..2638 CDD:227367
PHD_SF 2533..2579 CDD:304600
PHD2_3_BPTF 2589..2635 CDD:277035
Bromo_gcn5_like 2653..2752 CDD:99941 30/103 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468254
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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