DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and E(bx)

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001261188.1 Gene:E(bx) / 44811 FlyBaseID:FBgn0000541 Length:2761 Species:Drosophila melanogaster


Alignment Length:115 Identity:33/115 - (28%)
Similarity:59/115 - (51%) Gaps:13/115 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SSPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLS 74
            :|.::...|.:||::  ..:|: ||.|.||:||:  ...||:::::|||||..:..:|.:..|..
  Fly  2650 TSNDVEELKNLIKQM--QLHKS-AWPFMEPVDPK--EAPDYYKVIKEPMDLKRMEIKLESNTYTK 2709

  Fly    75 AADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIF--------EEMYSQ 116
            .::|..|:..||.|...|...:...|..|:.|:..|        |.::.|
  Fly  2710 LSEFIGDMTKIFDNCRYYNPKESSFYKCAEALESYFVQKIKNFRENVFDQ 2759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 31/108 (29%)
BET 190..252 CDD:435704
E(bx)NP_001261188.1 DDT 188..248 CDD:214726
WHIM1 286..330 CDD:464774
PHD1_BPTF 341..383 CDD:277034
WSD 405..>441 CDD:464775
PHD_SF 2533..2579 CDD:473978
PHD2_3_BPTF 2589..2635 CDD:277035
Bromo_gcn5_like 2653..2752 CDD:99941 30/103 (29%)
Blue background indicates that the domain is not in the aligned region.

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