DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and Acf

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_536734.2 Gene:Acf / 43751 FlyBaseID:FBgn0027620 Length:1476 Species:Drosophila melanogaster


Alignment Length:87 Identity:28/87 - (32%)
Similarity:44/87 - (50%) Gaps:2/87 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAADFAKDIRLIFYNTYLYTNPDH 97
            ||.|..|:  ....:.|||:|::.||||:.::.:||.|.|....:...||:|:|.|..||....:
  Fly  1378 AWPFLRPV--LTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELLSDIQLVFRNCDLYNVEGN 1440

  Fly    98 LCYHMAKQLQIIFEEMYSQVQL 119
            ..|....||:....:....:||
  Fly  1441 EIYDAGCQLERFVIDRCRDMQL 1462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 26/80 (33%)
BET 190..252 CDD:435704
AcfNP_536734.2 WAC_Acf1_DNA_bd 26..125 CDD:463140
DDT 346..411 CDD:214726
WSD 641..>666 CDD:464775
WSD <774..805 CDD:464775
PHD_RSF1 1064..1109 CDD:277018
PHD 1244..1284 CDD:214584
Bromo_Acf1_like 1349..1463 CDD:99936 28/87 (32%)
Blue background indicates that the domain is not in the aligned region.

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