DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and bptf

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_009297692.1 Gene:bptf / 324479 ZFINID:ZDB-GENE-030131-3200 Length:2900 Species:Danio rerio


Alignment Length:124 Identity:38/124 - (30%)
Similarity:57/124 - (45%) Gaps:17/124 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IKRLFSSTYKN-IAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAADFAKDIRL 84
            :||:..|...: :||.|.||:||.  ...||:.|::|||||||:..|:....|....:|..|:..
Zfish  2790 LKRILRSLQSHKMAWPFLEPVDPN--DAPDYYGIIKEPMDLSTMEERIQKRFYSKLTEFVADMTK 2852

  Fly    85 IFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQVQLYICSSGSKVRAEEESSSDESDSSS 143
            ||.|...|...|...|..|:.|:..|.:              |::|.:.|.|..:...|
Zfish  2853 IFDNCRYYNPSDSPFYQCAEFLESFFVQ--------------KLKAFKASRSHNNKLQS 2897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 33/93 (35%)
bptfXP_009297692.1 DDT 198..254 CDD:280886
WHIM1 296..345 CDD:292246
PHD1_BPTF 349..391 CDD:277034
WHIM2 414..439 CDD:292247
PP28 <1833..1881 CDD:287254
PHD2_3_BPTF 2665..2711 CDD:277035
PHD2_3_BPTF 2723..2769 CDD:277035
Bromo_gcn5_like 2785..2885 CDD:99941 34/110 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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