DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and brd2a

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_571275.2 Gene:brd2a / 30445 ZFINID:ZDB-GENE-990415-248 Length:836 Species:Danio rerio


Alignment Length:379 Identity:97/379 - (25%)
Similarity:137/379 - (36%) Gaps:131/379 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSA 75
            |.::..|..|:|.|.|..:...||.||:|:|...||||||::|:..||||||::.:::...|..|
Zfish   381 SQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDA 445

  Fly    76 ADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV------QLYICSSGSKVRAEEES 134
            ..||.|:||:|.|.|.|..|||....||::||.:||..::::      .|...|.|..:..:..|
Zfish   446 LQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDEPLESLPPASLGGGLGGDSSS 510

  Fly   135 SSDESDSSSPED--EVNGSEVSPS-------------------------------IMGAP----- 161
            ||..|.|||..|  ..:.||.|||                               :...|     
Zfish   511 SSSSSSSSSESDVSSESESESSPSSDSEEERAHRLAQLQEQVCTQLRAVHEQLAALSSTPIIKPK 575

  Fly   162 -------------------------------PSCTPTTECTP----------------------- 172
                                           |:..|....||                       
Zfish   576 KKKEKKDKKKKKKPEKHKRSRSVIEDEVVMRPAKIPKLPKTPKSRSNSKAATSTQSKKSSNKKSN 640

  Fly   173 --------TPDWTPPA----------TLETSEQQEPFTTEEDLDLHAKIQQLDGEVLLHVIHFIQ 219
                    .|.:.||.          ..|..|:..|.:.:|...|...|.:|.||.|..|:|.||
Zfish   641 KSKSSKKAQPTFFPPPLSHSGLTPHYDSEEEEETSPMSYDEKRQLSLDINRLPGEKLGRVVHIIQ 705

  Fly   220 RMEGA--EYCNKELEFDICKLKVHTKRGIRDY-------------LASKGFTGK 258
            ..|.:  :...:|:|.|...||..|.|.:..|             :|.||..||
Zfish   706 SREPSLRDTNPEEIEIDFETLKPSTLRELERYVMMCLRKKPRKPFVAIKGSAGK 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 44/100 (44%)
brd2aNP_571275.2 Bromo_Brdt_I_like 72..178 CDD:99929
Bromo_Brdt_II_like 383..484 CDD:99930 44/100 (44%)
BET 676..738 CDD:293640 20/61 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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