DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and brd2a

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_571275.2 Gene:brd2a / 30445 ZFINID:ZDB-GENE-990415-248 Length:836 Species:Danio rerio


Alignment Length:379 Identity:97/379 - (25%)
Similarity:137/379 - (36%) Gaps:131/379 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSA 75
            |.::..|..|:|.|.|..:...||.||:|:|...||||||::|:..||||||::.:::...|..|
Zfish   381 SQQLRYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDA 445

  Fly    76 ADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV------QLYICSSGSKVRAEEES 134
            ..||.|:||:|.|.|.|..|||....||::||.:||..::::      .|...|.|..:..:..|
Zfish   446 LQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKMPDEPLESLPPASLGGGLGGDSSS 510

  Fly   135 SSDESDSSSPED--EVNGSEVSPS-------------------------------IMGAP----- 161
            ||..|.|||..|  ..:.||.|||                               :...|     
Zfish   511 SSSSSSSSSESDVSSESESESSPSSDSEEERAHRLAQLQEQVCTQLRAVHEQLAALSSTPIIKPK 575

  Fly   162 -------------------------------PSCTPTTECTP----------------------- 172
                                           |:..|....||                       
Zfish   576 KKKEKKDKKKKKKPEKHKRSRSVIEDEVVMRPAKIPKLPKTPKSRSNSKAATSTQSKKSSNKKSN 640

  Fly   173 --------TPDWTPPA----------TLETSEQQEPFTTEEDLDLHAKIQQLDGEVLLHVIHFIQ 219
                    .|.:.||.          ..|..|:..|.:.:|...|...|.:|.||.|..|:|.||
Zfish   641 KSKSSKKAQPTFFPPPLSHSGLTPHYDSEEEEETSPMSYDEKRQLSLDINRLPGEKLGRVVHIIQ 705

  Fly   220 RMEGA--EYCNKELEFDICKLKVHTKRGIRDY-------------LASKGFTGK 258
            ..|.:  :...:|:|.|...||..|.|.:..|             :|.||..||
Zfish   706 SREPSLRDTNPEEIEIDFETLKPSTLRELERYVMMCLRKKPRKPFVAIKGSAGK 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 44/100 (44%)
BET 190..252 CDD:435704 21/76 (28%)
brd2aNP_571275.2 Bromo_Brdt_I_like 72..178 CDD:99929
Bromo_Brdt_II_like 383..484 CDD:99930 44/100 (44%)
BET 676..740 CDD:435704 21/63 (33%)
Blue background indicates that the domain is not in the aligned region.

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